Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19131 | 57616;57617;57618 | chr2:178597691;178597690;178597689 | chr2:179462418;179462417;179462416 |
N2AB | 17490 | 52693;52694;52695 | chr2:178597691;178597690;178597689 | chr2:179462418;179462417;179462416 |
N2A | 16563 | 49912;49913;49914 | chr2:178597691;178597690;178597689 | chr2:179462418;179462417;179462416 |
N2B | 10066 | 30421;30422;30423 | chr2:178597691;178597690;178597689 | chr2:179462418;179462417;179462416 |
Novex-1 | 10191 | 30796;30797;30798 | chr2:178597691;178597690;178597689 | chr2:179462418;179462417;179462416 |
Novex-2 | 10258 | 30997;30998;30999 | chr2:178597691;178597690;178597689 | chr2:179462418;179462417;179462416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.148 | 0.11 | 0.130388298395 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1541 | likely_benign | 0.1699 | benign | 0.019 | Stabilizing | None | N | 0.153 | neutral | None | None | None | None | N |
R/C | 0.1271 | likely_benign | 0.1337 | benign | -0.017 | Destabilizing | 0.676 | D | 0.34 | neutral | None | None | None | None | N |
R/D | 0.2501 | likely_benign | 0.2703 | benign | -0.084 | Destabilizing | 0.038 | N | 0.351 | neutral | None | None | None | None | N |
R/E | 0.15 | likely_benign | 0.1609 | benign | -0.026 | Destabilizing | 0.016 | N | 0.207 | neutral | None | None | None | None | N |
R/F | 0.3388 | likely_benign | 0.3826 | ambiguous | -0.199 | Destabilizing | 0.214 | N | 0.413 | neutral | None | None | None | None | N |
R/G | 0.0926 | likely_benign | 0.1071 | benign | -0.175 | Destabilizing | None | N | 0.183 | neutral | N | 0.449230226 | None | None | N |
R/H | 0.0785 | likely_benign | 0.0792 | benign | -0.687 | Destabilizing | 0.356 | N | 0.237 | neutral | None | None | None | None | N |
R/I | 0.144 | likely_benign | 0.1573 | benign | 0.495 | Stabilizing | 0.029 | N | 0.45 | neutral | N | 0.472395087 | None | None | N |
R/K | 0.064 | likely_benign | 0.0634 | benign | -0.003 | Destabilizing | None | N | 0.148 | neutral | N | 0.411613201 | None | None | N |
R/L | 0.1417 | likely_benign | 0.1572 | benign | 0.495 | Stabilizing | 0.006 | N | 0.279 | neutral | None | None | None | None | N |
R/M | 0.1261 | likely_benign | 0.1351 | benign | 0.124 | Stabilizing | 0.002 | N | 0.245 | neutral | None | None | None | None | N |
R/N | 0.1858 | likely_benign | 0.188 | benign | 0.292 | Stabilizing | 0.038 | N | 0.183 | neutral | None | None | None | None | N |
R/P | 0.7272 | likely_pathogenic | 0.7963 | pathogenic | 0.357 | Stabilizing | 0.072 | N | 0.44 | neutral | None | None | None | None | N |
R/Q | 0.0696 | likely_benign | 0.0672 | benign | 0.164 | Stabilizing | 0.001 | N | 0.218 | neutral | None | None | None | None | N |
R/S | 0.1649 | likely_benign | 0.1863 | benign | -0.053 | Destabilizing | None | N | 0.207 | neutral | N | 0.455998696 | None | None | N |
R/T | 0.0925 | likely_benign | 0.0969 | benign | 0.134 | Stabilizing | 0.012 | N | 0.322 | neutral | N | 0.471701654 | None | None | N |
R/V | 0.1631 | likely_benign | 0.1728 | benign | 0.357 | Stabilizing | 0.016 | N | 0.349 | neutral | None | None | None | None | N |
R/W | 0.1862 | likely_benign | 0.2246 | benign | -0.252 | Destabilizing | 0.864 | D | 0.348 | neutral | None | None | None | None | N |
R/Y | 0.2352 | likely_benign | 0.2664 | benign | 0.155 | Stabilizing | 0.356 | N | 0.401 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.