Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19132 | 57619;57620;57621 | chr2:178597688;178597687;178597686 | chr2:179462415;179462414;179462413 |
N2AB | 17491 | 52696;52697;52698 | chr2:178597688;178597687;178597686 | chr2:179462415;179462414;179462413 |
N2A | 16564 | 49915;49916;49917 | chr2:178597688;178597687;178597686 | chr2:179462415;179462414;179462413 |
N2B | 10067 | 30424;30425;30426 | chr2:178597688;178597687;178597686 | chr2:179462415;179462414;179462413 |
Novex-1 | 10192 | 30799;30800;30801 | chr2:178597688;178597687;178597686 | chr2:179462415;179462414;179462413 |
Novex-2 | 10259 | 31000;31001;31002 | chr2:178597688;178597687;178597686 | chr2:179462415;179462414;179462413 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.108 | 0.143 | 0.180583059064 | gnomAD-4.0.0 | 1.59218E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
T/S | rs1245250461 | None | 0.001 | N | 0.233 | 0.108 | 0.214338557667 | gnomAD-4.0.0 | 2.05312E-06 | None | None | None | None | N | None | 0 | 2.23804E-05 | None | 0 | 0 | None | 0 | 0 | 8.99625E-07 | 0 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0517 | likely_benign | 0.0529 | benign | -0.298 | Destabilizing | None | N | 0.108 | neutral | N | 0.427814804 | None | None | N |
T/C | 0.2271 | likely_benign | 0.2177 | benign | -0.285 | Destabilizing | 0.245 | N | 0.299 | neutral | None | None | None | None | N |
T/D | 0.1374 | likely_benign | 0.1487 | benign | 0.213 | Stabilizing | 0.004 | N | 0.324 | neutral | None | None | None | None | N |
T/E | 0.1183 | likely_benign | 0.1175 | benign | 0.141 | Stabilizing | None | N | 0.169 | neutral | None | None | None | None | N |
T/F | 0.1398 | likely_benign | 0.1456 | benign | -0.796 | Destabilizing | 0.245 | N | 0.448 | neutral | None | None | None | None | N |
T/G | 0.1204 | likely_benign | 0.1257 | benign | -0.426 | Destabilizing | None | N | 0.173 | neutral | None | None | None | None | N |
T/H | 0.1454 | likely_benign | 0.1493 | benign | -0.664 | Destabilizing | 0.497 | N | 0.385 | neutral | None | None | None | None | N |
T/I | 0.0764 | likely_benign | 0.0773 | benign | -0.081 | Destabilizing | 0.033 | N | 0.359 | neutral | N | 0.441592178 | None | None | N |
T/K | 0.113 | likely_benign | 0.1256 | benign | -0.336 | Destabilizing | 0.008 | N | 0.334 | neutral | None | None | None | None | N |
T/L | 0.0633 | likely_benign | 0.0651 | benign | -0.081 | Destabilizing | 0.009 | N | 0.339 | neutral | None | None | None | None | N |
T/M | 0.0723 | likely_benign | 0.075 | benign | -0.036 | Destabilizing | 0.245 | N | 0.293 | neutral | None | None | None | None | N |
T/N | 0.0734 | likely_benign | 0.0746 | benign | -0.133 | Destabilizing | 0.014 | N | 0.204 | neutral | N | 0.439109233 | None | None | N |
T/P | 0.0496 | likely_benign | 0.0462 | benign | -0.124 | Destabilizing | None | N | 0.181 | neutral | N | 0.382234443 | None | None | N |
T/Q | 0.1182 | likely_benign | 0.1179 | benign | -0.329 | Destabilizing | 0.018 | N | 0.355 | neutral | None | None | None | None | N |
T/R | 0.1144 | likely_benign | 0.1358 | benign | -0.064 | Destabilizing | 0.018 | N | 0.347 | neutral | None | None | None | None | N |
T/S | 0.073 | likely_benign | 0.0715 | benign | -0.337 | Destabilizing | 0.001 | N | 0.233 | neutral | N | 0.446227206 | None | None | N |
T/V | 0.0685 | likely_benign | 0.0678 | benign | -0.124 | Destabilizing | 0.004 | N | 0.23 | neutral | None | None | None | None | N |
T/W | 0.3921 | ambiguous | 0.4117 | ambiguous | -0.831 | Destabilizing | 0.788 | D | 0.379 | neutral | None | None | None | None | N |
T/Y | 0.1652 | likely_benign | 0.168 | benign | -0.533 | Destabilizing | 0.245 | N | 0.451 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.