Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19133 | 57622;57623;57624 | chr2:178597685;178597684;178597683 | chr2:179462412;179462411;179462410 |
N2AB | 17492 | 52699;52700;52701 | chr2:178597685;178597684;178597683 | chr2:179462412;179462411;179462410 |
N2A | 16565 | 49918;49919;49920 | chr2:178597685;178597684;178597683 | chr2:179462412;179462411;179462410 |
N2B | 10068 | 30427;30428;30429 | chr2:178597685;178597684;178597683 | chr2:179462412;179462411;179462410 |
Novex-1 | 10193 | 30802;30803;30804 | chr2:178597685;178597684;178597683 | chr2:179462412;179462411;179462410 |
Novex-2 | 10260 | 31003;31004;31005 | chr2:178597685;178597684;178597683 | chr2:179462412;179462411;179462410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1576219060 | None | 0.999 | D | 0.727 | 0.459 | 0.663553952235 | gnomAD-4.0.0 | 3.18431E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 3.02572E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6051 | likely_pathogenic | 0.6687 | pathogenic | -2.202 | Highly Destabilizing | 0.997 | D | 0.502 | neutral | None | None | None | None | N |
L/C | 0.8064 | likely_pathogenic | 0.848 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
L/D | 0.9836 | likely_pathogenic | 0.9905 | pathogenic | -1.778 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/E | 0.9344 | likely_pathogenic | 0.9579 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/F | 0.4206 | ambiguous | 0.5678 | pathogenic | -1.488 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | D | 0.535548063 | None | None | N |
L/G | 0.9222 | likely_pathogenic | 0.9497 | pathogenic | -2.631 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/H | 0.8777 | likely_pathogenic | 0.9314 | pathogenic | -1.816 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/I | 0.1008 | likely_benign | 0.1177 | benign | -1.025 | Destabilizing | 0.981 | D | 0.507 | neutral | N | 0.450483807 | None | None | N |
L/K | 0.8992 | likely_pathogenic | 0.9271 | pathogenic | -1.541 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
L/M | 0.2114 | likely_benign | 0.2461 | benign | -0.837 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
L/N | 0.9238 | likely_pathogenic | 0.947 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
L/P | 0.4295 | ambiguous | 0.5196 | ambiguous | -1.391 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/Q | 0.8144 | likely_pathogenic | 0.8805 | pathogenic | -1.564 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/R | 0.8601 | likely_pathogenic | 0.9101 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/S | 0.8546 | likely_pathogenic | 0.9197 | pathogenic | -2.205 | Highly Destabilizing | 0.999 | D | 0.772 | deleterious | N | 0.521280453 | None | None | N |
L/T | 0.6798 | likely_pathogenic | 0.7544 | pathogenic | -1.956 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
L/V | 0.1067 | likely_benign | 0.1243 | benign | -1.391 | Destabilizing | 0.767 | D | 0.286 | neutral | N | 0.475574252 | None | None | N |
L/W | 0.796 | likely_pathogenic | 0.8931 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
L/Y | 0.8446 | likely_pathogenic | 0.9035 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.