Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19146 | 57661;57662;57663 | chr2:178597646;178597645;178597644 | chr2:179462373;179462372;179462371 |
N2AB | 17505 | 52738;52739;52740 | chr2:178597646;178597645;178597644 | chr2:179462373;179462372;179462371 |
N2A | 16578 | 49957;49958;49959 | chr2:178597646;178597645;178597644 | chr2:179462373;179462372;179462371 |
N2B | 10081 | 30466;30467;30468 | chr2:178597646;178597645;178597644 | chr2:179462373;179462372;179462371 |
Novex-1 | 10206 | 30841;30842;30843 | chr2:178597646;178597645;178597644 | chr2:179462373;179462372;179462371 |
Novex-2 | 10273 | 31042;31043;31044 | chr2:178597646;178597645;178597644 | chr2:179462373;179462372;179462371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1427077002 | 0.074 | 0.959 | N | 0.733 | 0.355 | 0.78372721315 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
S/L | rs1427077002 | 0.074 | 0.959 | N | 0.733 | 0.355 | 0.78372721315 | gnomAD-4.0.0 | 4.7771E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.76591E-05 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1581 | likely_benign | 0.1669 | benign | -1.025 | Destabilizing | 0.826 | D | 0.674 | neutral | N | 0.509777253 | None | None | N |
S/C | 0.1289 | likely_benign | 0.1322 | benign | -0.718 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/D | 0.9566 | likely_pathogenic | 0.9623 | pathogenic | -0.866 | Destabilizing | 0.884 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/E | 0.9741 | likely_pathogenic | 0.9745 | pathogenic | -0.7 | Destabilizing | 0.939 | D | 0.72 | prob.delet. | None | None | None | None | N |
S/F | 0.8223 | likely_pathogenic | 0.8593 | pathogenic | -1.089 | Destabilizing | 0.997 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/G | 0.3735 | ambiguous | 0.4441 | ambiguous | -1.389 | Destabilizing | 0.863 | D | 0.728 | prob.delet. | None | None | None | None | N |
S/H | 0.8347 | likely_pathogenic | 0.846 | pathogenic | -1.72 | Destabilizing | 0.991 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/I | 0.5947 | likely_pathogenic | 0.6265 | pathogenic | -0.106 | Destabilizing | 0.997 | D | 0.763 | deleterious | None | None | None | None | N |
S/K | 0.9924 | likely_pathogenic | 0.9924 | pathogenic | -0.066 | Destabilizing | 0.17 | N | 0.471 | neutral | None | None | None | None | N |
S/L | 0.4696 | ambiguous | 0.5202 | ambiguous | -0.106 | Destabilizing | 0.959 | D | 0.733 | prob.delet. | N | 0.494468649 | None | None | N |
S/M | 0.5777 | likely_pathogenic | 0.5981 | pathogenic | -0.087 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/N | 0.6035 | likely_pathogenic | 0.6234 | pathogenic | -0.627 | Destabilizing | 0.079 | N | 0.389 | neutral | None | None | None | None | N |
S/P | 0.9958 | likely_pathogenic | 0.997 | pathogenic | -0.379 | Destabilizing | 0.996 | D | 0.773 | deleterious | N | 0.500509036 | None | None | N |
S/Q | 0.9343 | likely_pathogenic | 0.9336 | pathogenic | -0.485 | Destabilizing | 0.982 | D | 0.782 | deleterious | None | None | None | None | N |
S/R | 0.9839 | likely_pathogenic | 0.9853 | pathogenic | -0.411 | Destabilizing | 0.884 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/T | 0.1087 | likely_benign | 0.1134 | benign | -0.455 | Destabilizing | 0.826 | D | 0.697 | prob.neutral | N | 0.452923892 | None | None | N |
S/V | 0.4353 | ambiguous | 0.4679 | ambiguous | -0.379 | Destabilizing | 0.991 | D | 0.765 | deleterious | None | None | None | None | N |
S/W | 0.9075 | likely_pathogenic | 0.9226 | pathogenic | -1.169 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
S/Y | 0.7518 | likely_pathogenic | 0.7845 | pathogenic | -0.77 | Destabilizing | 0.997 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.