Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1915 | 5968;5969;5970 | chr2:178776121;178776120;178776119 | chr2:179640848;179640847;179640846 |
N2AB | 1915 | 5968;5969;5970 | chr2:178776121;178776120;178776119 | chr2:179640848;179640847;179640846 |
N2A | 1915 | 5968;5969;5970 | chr2:178776121;178776120;178776119 | chr2:179640848;179640847;179640846 |
N2B | 1869 | 5830;5831;5832 | chr2:178776121;178776120;178776119 | chr2:179640848;179640847;179640846 |
Novex-1 | 1869 | 5830;5831;5832 | chr2:178776121;178776120;178776119 | chr2:179640848;179640847;179640846 |
Novex-2 | 1869 | 5830;5831;5832 | chr2:178776121;178776120;178776119 | chr2:179640848;179640847;179640846 |
Novex-3 | 1915 | 5968;5969;5970 | chr2:178776121;178776120;178776119 | chr2:179640848;179640847;179640846 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs375388374 | -0.518 | 0.994 | N | 0.62 | 0.436 | None | gnomAD-2.1.1 | 7.96E-06 | None | None | None | None | I | None | 1.23062E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs375388374 | -0.518 | 0.994 | N | 0.62 | 0.436 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs375388374 | -0.518 | 0.994 | N | 0.62 | 0.436 | None | gnomAD-4.0.0 | 2.56104E-06 | None | None | None | None | I | None | 3.38158E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4899 | ambiguous | 0.6125 | pathogenic | -0.748 | Destabilizing | 0.994 | D | 0.653 | neutral | N | 0.513183643 | None | None | I |
E/C | 0.983 | likely_pathogenic | 0.9899 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
E/D | 0.3263 | likely_benign | 0.3991 | ambiguous | -1.094 | Destabilizing | 0.104 | N | 0.211 | neutral | N | 0.514349462 | None | None | I |
E/F | 0.9727 | likely_pathogenic | 0.9831 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
E/G | 0.6324 | likely_pathogenic | 0.7323 | pathogenic | -1.071 | Destabilizing | 0.994 | D | 0.72 | prob.delet. | D | 0.635226582 | None | None | I |
E/H | 0.9096 | likely_pathogenic | 0.9495 | pathogenic | -0.937 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
E/I | 0.8076 | likely_pathogenic | 0.869 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
E/K | 0.6349 | likely_pathogenic | 0.7688 | pathogenic | -0.668 | Destabilizing | 0.994 | D | 0.62 | neutral | N | 0.503072274 | None | None | I |
E/L | 0.8836 | likely_pathogenic | 0.9268 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
E/M | 0.8699 | likely_pathogenic | 0.9127 | pathogenic | 0.563 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
E/N | 0.6909 | likely_pathogenic | 0.7744 | pathogenic | -0.934 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | I |
E/P | 0.9979 | likely_pathogenic | 0.9992 | pathogenic | -0.15 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
E/Q | 0.4175 | ambiguous | 0.5199 | ambiguous | -0.838 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | N | 0.509381845 | None | None | I |
E/R | 0.8051 | likely_pathogenic | 0.886 | pathogenic | -0.507 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
E/S | 0.5075 | ambiguous | 0.6069 | pathogenic | -1.228 | Destabilizing | 0.992 | D | 0.627 | neutral | None | None | None | None | I |
E/T | 0.5866 | likely_pathogenic | 0.7051 | pathogenic | -0.975 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/V | 0.5947 | likely_pathogenic | 0.6965 | pathogenic | -0.15 | Destabilizing | 0.999 | D | 0.819 | deleterious | N | 0.512365459 | None | None | I |
E/W | 0.9937 | likely_pathogenic | 0.9966 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
E/Y | 0.96 | likely_pathogenic | 0.9767 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.