Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19161 | 57706;57707;57708 | chr2:178597601;178597600;178597599 | chr2:179462328;179462327;179462326 |
N2AB | 17520 | 52783;52784;52785 | chr2:178597601;178597600;178597599 | chr2:179462328;179462327;179462326 |
N2A | 16593 | 50002;50003;50004 | chr2:178597601;178597600;178597599 | chr2:179462328;179462327;179462326 |
N2B | 10096 | 30511;30512;30513 | chr2:178597601;178597600;178597599 | chr2:179462328;179462327;179462326 |
Novex-1 | 10221 | 30886;30887;30888 | chr2:178597601;178597600;178597599 | chr2:179462328;179462327;179462326 |
Novex-2 | 10288 | 31087;31088;31089 | chr2:178597601;178597600;178597599 | chr2:179462328;179462327;179462326 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs754992982 | -1.697 | 1.0 | D | 0.854 | 0.868 | 0.845456798365 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.92E-06 | 0 |
Y/C | rs754992982 | -1.697 | 1.0 | D | 0.854 | 0.868 | 0.845456798365 | gnomAD-4.0.0 | 3.18544E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86599E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.997 | likely_pathogenic | 0.9984 | pathogenic | -2.634 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/C | 0.9349 | likely_pathogenic | 0.9716 | pathogenic | -2.06 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.629278272 | None | None | N |
Y/D | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -3.409 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.629278272 | None | None | N |
Y/E | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -3.173 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/F | 0.1435 | likely_benign | 0.1776 | benign | -0.947 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | D | 0.575982202 | None | None | N |
Y/G | 0.9953 | likely_pathogenic | 0.9972 | pathogenic | -3.09 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
Y/H | 0.9795 | likely_pathogenic | 0.991 | pathogenic | -2.22 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.629076468 | None | None | N |
Y/I | 0.9365 | likely_pathogenic | 0.9541 | pathogenic | -1.119 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/K | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -2.205 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
Y/L | 0.8885 | likely_pathogenic | 0.9095 | pathogenic | -1.119 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
Y/M | 0.9828 | likely_pathogenic | 0.9888 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/N | 0.9942 | likely_pathogenic | 0.997 | pathogenic | -3.153 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.629278272 | None | None | N |
Y/P | 0.9985 | likely_pathogenic | 0.9992 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/Q | 0.9991 | likely_pathogenic | 0.9996 | pathogenic | -2.759 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/R | 0.9964 | likely_pathogenic | 0.9978 | pathogenic | -2.282 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/S | 0.9935 | likely_pathogenic | 0.9967 | pathogenic | -3.468 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.629278272 | None | None | N |
Y/T | 0.9972 | likely_pathogenic | 0.9986 | pathogenic | -3.086 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/V | 0.9287 | likely_pathogenic | 0.9485 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/W | 0.7554 | likely_pathogenic | 0.8312 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.