Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19168 | 57727;57728;57729 | chr2:178597580;178597579;178597578 | chr2:179462307;179462306;179462305 |
N2AB | 17527 | 52804;52805;52806 | chr2:178597580;178597579;178597578 | chr2:179462307;179462306;179462305 |
N2A | 16600 | 50023;50024;50025 | chr2:178597580;178597579;178597578 | chr2:179462307;179462306;179462305 |
N2B | 10103 | 30532;30533;30534 | chr2:178597580;178597579;178597578 | chr2:179462307;179462306;179462305 |
Novex-1 | 10228 | 30907;30908;30909 | chr2:178597580;178597579;178597578 | chr2:179462307;179462306;179462305 |
Novex-2 | 10295 | 31108;31109;31110 | chr2:178597580;178597579;178597578 | chr2:179462307;179462306;179462305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.285 | 0.099 | 0.168933306366 | gnomAD-4.0.0 | 1.59371E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43563E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0519 | likely_benign | 0.0698 | benign | -0.028 | Destabilizing | None | N | 0.204 | neutral | N | 0.448192863 | None | None | I |
E/C | 0.6078 | likely_pathogenic | 0.7051 | pathogenic | -0.024 | Destabilizing | 0.824 | D | 0.411 | neutral | None | None | None | None | I |
E/D | 0.0873 | likely_benign | 0.0922 | benign | -0.274 | Destabilizing | None | N | 0.285 | neutral | N | 0.467298699 | None | None | I |
E/F | 0.4802 | ambiguous | 0.6068 | pathogenic | -0.108 | Destabilizing | 0.555 | D | 0.415 | neutral | None | None | None | None | I |
E/G | 0.0901 | likely_benign | 0.1124 | benign | -0.146 | Destabilizing | 0.027 | N | 0.414 | neutral | N | 0.510396115 | None | None | I |
E/H | 0.2708 | likely_benign | 0.3287 | benign | 0.411 | Stabilizing | 0.791 | D | 0.383 | neutral | None | None | None | None | I |
E/I | 0.149 | likely_benign | 0.2001 | benign | 0.223 | Stabilizing | 0.38 | N | 0.433 | neutral | None | None | None | None | I |
E/K | 0.0898 | likely_benign | 0.1004 | benign | 0.511 | Stabilizing | 0.117 | N | 0.423 | neutral | N | 0.458639143 | None | None | I |
E/L | 0.1706 | likely_benign | 0.2296 | benign | 0.223 | Stabilizing | 0.081 | N | 0.442 | neutral | None | None | None | None | I |
E/M | 0.2102 | likely_benign | 0.2806 | benign | 0.095 | Stabilizing | 0.824 | D | 0.439 | neutral | None | None | None | None | I |
E/N | 0.1331 | likely_benign | 0.1583 | benign | 0.298 | Stabilizing | 0.081 | N | 0.367 | neutral | None | None | None | None | I |
E/P | 0.1697 | likely_benign | 0.245 | benign | 0.157 | Stabilizing | 0.38 | N | 0.409 | neutral | None | None | None | None | I |
E/Q | 0.0976 | likely_benign | 0.1148 | benign | 0.302 | Stabilizing | 0.211 | N | 0.401 | neutral | N | 0.510222757 | None | None | I |
E/R | 0.1526 | likely_benign | 0.1877 | benign | 0.684 | Stabilizing | 0.38 | N | 0.365 | neutral | None | None | None | None | I |
E/S | 0.0846 | likely_benign | 0.1062 | benign | 0.159 | Stabilizing | 0.035 | N | 0.389 | neutral | None | None | None | None | I |
E/T | 0.0838 | likely_benign | 0.1128 | benign | 0.261 | Stabilizing | 0.081 | N | 0.451 | neutral | None | None | None | None | I |
E/V | 0.0991 | likely_benign | 0.1258 | benign | 0.157 | Stabilizing | 0.062 | N | 0.46 | neutral | N | 0.479401205 | None | None | I |
E/W | 0.7485 | likely_pathogenic | 0.8293 | pathogenic | -0.068 | Destabilizing | 0.935 | D | 0.489 | neutral | None | None | None | None | I |
E/Y | 0.3914 | ambiguous | 0.4926 | ambiguous | 0.119 | Stabilizing | 0.555 | D | 0.442 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.