Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1917 | 5974;5975;5976 | chr2:178776115;178776114;178776113 | chr2:179640842;179640841;179640840 |
N2AB | 1917 | 5974;5975;5976 | chr2:178776115;178776114;178776113 | chr2:179640842;179640841;179640840 |
N2A | 1917 | 5974;5975;5976 | chr2:178776115;178776114;178776113 | chr2:179640842;179640841;179640840 |
N2B | 1871 | 5836;5837;5838 | chr2:178776115;178776114;178776113 | chr2:179640842;179640841;179640840 |
Novex-1 | 1871 | 5836;5837;5838 | chr2:178776115;178776114;178776113 | chr2:179640842;179640841;179640840 |
Novex-2 | 1871 | 5836;5837;5838 | chr2:178776115;178776114;178776113 | chr2:179640842;179640841;179640840 |
Novex-3 | 1917 | 5974;5975;5976 | chr2:178776115;178776114;178776113 | chr2:179640842;179640841;179640840 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 1.0 | N | 0.616 | 0.552 | 0.49676076625 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1225 | likely_benign | 0.1508 | benign | -0.403 | Destabilizing | 1.0 | D | 0.564 | neutral | N | 0.489183726 | None | None | I |
P/C | 0.8517 | likely_pathogenic | 0.8747 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
P/D | 0.7151 | likely_pathogenic | 0.7916 | pathogenic | -0.523 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
P/E | 0.4713 | ambiguous | 0.5483 | ambiguous | -0.652 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
P/F | 0.8181 | likely_pathogenic | 0.8614 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
P/G | 0.5597 | ambiguous | 0.6228 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/H | 0.4565 | ambiguous | 0.5491 | ambiguous | -0.081 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.550828441 | None | None | I |
P/I | 0.4044 | ambiguous | 0.4426 | ambiguous | -0.327 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/K | 0.6164 | likely_pathogenic | 0.7216 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
P/L | 0.2214 | likely_benign | 0.2639 | benign | -0.327 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.508939269 | None | None | I |
P/M | 0.4455 | ambiguous | 0.4981 | ambiguous | -0.436 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
P/N | 0.539 | ambiguous | 0.6056 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
P/Q | 0.2956 | likely_benign | 0.3707 | ambiguous | -0.485 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
P/R | 0.4862 | ambiguous | 0.6192 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.50184939 | None | None | I |
P/S | 0.2331 | likely_benign | 0.2836 | benign | -0.503 | Destabilizing | 1.0 | D | 0.614 | neutral | N | 0.453440208 | None | None | I |
P/T | 0.1541 | likely_benign | 0.1879 | benign | -0.54 | Destabilizing | 1.0 | D | 0.616 | neutral | N | 0.50795922 | None | None | I |
P/V | 0.3131 | likely_benign | 0.3508 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
P/W | 0.9264 | likely_pathogenic | 0.9498 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
P/Y | 0.8051 | likely_pathogenic | 0.851 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.