Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19171 | 57736;57737;57738 | chr2:178597571;178597570;178597569 | chr2:179462298;179462297;179462296 |
N2AB | 17530 | 52813;52814;52815 | chr2:178597571;178597570;178597569 | chr2:179462298;179462297;179462296 |
N2A | 16603 | 50032;50033;50034 | chr2:178597571;178597570;178597569 | chr2:179462298;179462297;179462296 |
N2B | 10106 | 30541;30542;30543 | chr2:178597571;178597570;178597569 | chr2:179462298;179462297;179462296 |
Novex-1 | 10231 | 30916;30917;30918 | chr2:178597571;178597570;178597569 | chr2:179462298;179462297;179462296 |
Novex-2 | 10298 | 31117;31118;31119 | chr2:178597571;178597570;178597569 | chr2:179462298;179462297;179462296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1336572804 | -0.419 | 0.999 | N | 0.479 | 0.296 | 0.459463830659 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
E/D | rs1336572804 | -0.419 | 0.999 | N | 0.479 | 0.296 | 0.459463830659 | gnomAD-4.0.0 | 3.18854E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72282E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1776 | likely_benign | 0.2094 | benign | -0.336 | Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.489406221 | None | None | I |
E/C | 0.8308 | likely_pathogenic | 0.8434 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/D | 0.2406 | likely_benign | 0.2571 | benign | -0.431 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.490166689 | None | None | I |
E/F | 0.7188 | likely_pathogenic | 0.7514 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/G | 0.224 | likely_benign | 0.261 | benign | -0.553 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | D | 0.526971084 | None | None | I |
E/H | 0.5316 | ambiguous | 0.5664 | pathogenic | 0.151 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
E/I | 0.3227 | likely_benign | 0.3577 | ambiguous | 0.207 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
E/K | 0.2105 | likely_benign | 0.2467 | benign | 0.315 | Stabilizing | 0.999 | D | 0.665 | neutral | N | 0.509430536 | None | None | I |
E/L | 0.4494 | ambiguous | 0.4835 | ambiguous | 0.207 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/M | 0.4043 | ambiguous | 0.4387 | ambiguous | 0.209 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
E/N | 0.3382 | likely_benign | 0.3812 | ambiguous | -0.112 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
E/P | 0.8857 | likely_pathogenic | 0.8973 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/Q | 0.1325 | likely_benign | 0.1476 | benign | -0.055 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.5012752 | None | None | I |
E/R | 0.3765 | ambiguous | 0.4091 | ambiguous | 0.564 | Stabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
E/S | 0.1737 | likely_benign | 0.2084 | benign | -0.254 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/T | 0.1856 | likely_benign | 0.2082 | benign | -0.071 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
E/V | 0.1976 | likely_benign | 0.219 | benign | 0.047 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | D | 0.532272897 | None | None | I |
E/W | 0.8989 | likely_pathogenic | 0.9102 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/Y | 0.6551 | likely_pathogenic | 0.6862 | pathogenic | 0.154 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.