Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19173 | 57742;57743;57744 | chr2:178597565;178597564;178597563 | chr2:179462292;179462291;179462290 |
N2AB | 17532 | 52819;52820;52821 | chr2:178597565;178597564;178597563 | chr2:179462292;179462291;179462290 |
N2A | 16605 | 50038;50039;50040 | chr2:178597565;178597564;178597563 | chr2:179462292;179462291;179462290 |
N2B | 10108 | 30547;30548;30549 | chr2:178597565;178597564;178597563 | chr2:179462292;179462291;179462290 |
Novex-1 | 10233 | 30922;30923;30924 | chr2:178597565;178597564;178597563 | chr2:179462292;179462291;179462290 |
Novex-2 | 10300 | 31123;31124;31125 | chr2:178597565;178597564;178597563 | chr2:179462292;179462291;179462290 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1009412718 | 0.251 | 0.942 | N | 0.669 | 0.294 | 0.308278614506 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
K/N | rs1009412718 | 0.251 | 0.942 | N | 0.669 | 0.294 | 0.308278614506 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1009412718 | 0.251 | 0.942 | N | 0.669 | 0.294 | 0.308278614506 | gnomAD-4.0.0 | 6.41728E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.24719E-04 | 9.58304E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4899 | ambiguous | 0.4906 | ambiguous | -0.335 | Destabilizing | 0.86 | D | 0.585 | neutral | None | None | None | None | N |
K/C | 0.6846 | likely_pathogenic | 0.6782 | pathogenic | -0.505 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
K/D | 0.7877 | likely_pathogenic | 0.7887 | pathogenic | 0.404 | Stabilizing | 0.956 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/E | 0.2277 | likely_benign | 0.2262 | benign | 0.465 | Stabilizing | 0.698 | D | 0.529 | neutral | N | 0.484897451 | None | None | N |
K/F | 0.8257 | likely_pathogenic | 0.8275 | pathogenic | -0.302 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/G | 0.614 | likely_pathogenic | 0.6185 | pathogenic | -0.618 | Destabilizing | 0.956 | D | 0.644 | neutral | None | None | None | None | N |
K/H | 0.3466 | ambiguous | 0.3345 | benign | -0.928 | Destabilizing | 0.994 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/I | 0.4165 | ambiguous | 0.4261 | ambiguous | 0.358 | Stabilizing | 0.978 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/L | 0.4333 | ambiguous | 0.4458 | ambiguous | 0.358 | Stabilizing | 0.956 | D | 0.644 | neutral | None | None | None | None | N |
K/M | 0.257 | likely_benign | 0.2648 | benign | 0.19 | Stabilizing | 0.997 | D | 0.685 | prob.neutral | N | 0.493836766 | None | None | N |
K/N | 0.5558 | ambiguous | 0.558 | ambiguous | -0.018 | Destabilizing | 0.942 | D | 0.669 | neutral | N | 0.518340808 | None | None | N |
K/P | 0.9115 | likely_pathogenic | 0.9156 | pathogenic | 0.157 | Stabilizing | 0.978 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/Q | 0.1246 | likely_benign | 0.1229 | benign | -0.164 | Destabilizing | 0.942 | D | 0.667 | neutral | N | 0.486671107 | None | None | N |
K/R | 0.0808 | likely_benign | 0.0804 | benign | -0.242 | Destabilizing | 0.014 | N | 0.249 | neutral | N | 0.455310837 | None | None | N |
K/S | 0.4746 | ambiguous | 0.4827 | ambiguous | -0.72 | Destabilizing | 0.86 | D | 0.585 | neutral | None | None | None | None | N |
K/T | 0.1962 | likely_benign | 0.2025 | benign | -0.471 | Destabilizing | 0.942 | D | 0.698 | prob.neutral | N | 0.450227517 | None | None | N |
K/V | 0.381 | ambiguous | 0.3899 | ambiguous | 0.157 | Stabilizing | 0.956 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/W | 0.7441 | likely_pathogenic | 0.7428 | pathogenic | -0.174 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/Y | 0.6676 | likely_pathogenic | 0.6691 | pathogenic | 0.148 | Stabilizing | 0.993 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.