Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19178 | 57757;57758;57759 | chr2:178597550;178597549;178597548 | chr2:179462277;179462276;179462275 |
N2AB | 17537 | 52834;52835;52836 | chr2:178597550;178597549;178597548 | chr2:179462277;179462276;179462275 |
N2A | 16610 | 50053;50054;50055 | chr2:178597550;178597549;178597548 | chr2:179462277;179462276;179462275 |
N2B | 10113 | 30562;30563;30564 | chr2:178597550;178597549;178597548 | chr2:179462277;179462276;179462275 |
Novex-1 | 10238 | 30937;30938;30939 | chr2:178597550;178597549;178597548 | chr2:179462277;179462276;179462275 |
Novex-2 | 10305 | 31138;31139;31140 | chr2:178597550;178597549;178597548 | chr2:179462277;179462276;179462275 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.641 | 0.439 | 0.651711194101 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
V/I | rs762241944 | -0.39 | 0.997 | N | 0.563 | 0.305 | 0.52730433808 | gnomAD-2.1.1 | 7.74E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.28058E-04 | None | 0 | 0 | 0 |
V/I | rs762241944 | -0.39 | 0.997 | N | 0.563 | 0.305 | 0.52730433808 | gnomAD-4.0.0 | 2.1241E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.60944E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9142 | likely_pathogenic | 0.9346 | pathogenic | -2.527 | Highly Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.486085089 | None | None | N |
V/C | 0.9707 | likely_pathogenic | 0.9761 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.494 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.509469263 | None | None | N |
V/E | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -3.206 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
V/F | 0.976 | likely_pathogenic | 0.9773 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.828 | deleterious | N | 0.508201816 | None | None | N |
V/G | 0.9842 | likely_pathogenic | 0.9856 | pathogenic | -3.103 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.509469263 | None | None | N |
V/H | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -2.945 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
V/I | 0.1713 | likely_benign | 0.1786 | benign | -0.859 | Destabilizing | 0.997 | D | 0.563 | neutral | N | 0.457911068 | None | None | N |
V/K | 0.9988 | likely_pathogenic | 0.9989 | pathogenic | -2.16 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
V/L | 0.8532 | likely_pathogenic | 0.8793 | pathogenic | -0.859 | Destabilizing | 0.997 | D | 0.659 | neutral | N | 0.482108917 | None | None | N |
V/M | 0.9079 | likely_pathogenic | 0.9319 | pathogenic | -1.005 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
V/N | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -2.738 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
V/P | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/Q | 0.9983 | likely_pathogenic | 0.9985 | pathogenic | -2.445 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/R | 0.9965 | likely_pathogenic | 0.9968 | pathogenic | -2.079 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
V/S | 0.9907 | likely_pathogenic | 0.9926 | pathogenic | -3.266 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/T | 0.8984 | likely_pathogenic | 0.9271 | pathogenic | -2.834 | Highly Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -2.105 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/Y | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -1.782 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.