Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19179 | 57760;57761;57762 | chr2:178597547;178597546;178597545 | chr2:179462274;179462273;179462272 |
N2AB | 17538 | 52837;52838;52839 | chr2:178597547;178597546;178597545 | chr2:179462274;179462273;179462272 |
N2A | 16611 | 50056;50057;50058 | chr2:178597547;178597546;178597545 | chr2:179462274;179462273;179462272 |
N2B | 10114 | 30565;30566;30567 | chr2:178597547;178597546;178597545 | chr2:179462274;179462273;179462272 |
Novex-1 | 10239 | 30940;30941;30942 | chr2:178597547;178597546;178597545 | chr2:179462274;179462273;179462272 |
Novex-2 | 10306 | 31141;31142;31143 | chr2:178597547;178597546;178597545 | chr2:179462274;179462273;179462272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1383899808 | None | 0.989 | N | 0.551 | 0.337 | 0.342631996419 | gnomAD-4.0.0 | 6.85537E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00314E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.733 | likely_pathogenic | 0.7267 | pathogenic | -0.535 | Destabilizing | 0.978 | D | 0.621 | neutral | N | 0.466717122 | None | None | I |
D/C | 0.9771 | likely_pathogenic | 0.9749 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
D/E | 0.4346 | ambiguous | 0.3872 | ambiguous | -0.743 | Destabilizing | 0.198 | N | 0.216 | neutral | N | 0.365187478 | None | None | I |
D/F | 0.9693 | likely_pathogenic | 0.9678 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/G | 0.8536 | likely_pathogenic | 0.8538 | pathogenic | -0.928 | Destabilizing | 0.989 | D | 0.598 | neutral | N | 0.486863108 | None | None | I |
D/H | 0.7771 | likely_pathogenic | 0.7711 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.652 | neutral | N | 0.419619395 | None | None | I |
D/I | 0.9157 | likely_pathogenic | 0.9057 | pathogenic | 0.517 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | I |
D/K | 0.9171 | likely_pathogenic | 0.9051 | pathogenic | -0.58 | Destabilizing | 0.983 | D | 0.6 | neutral | None | None | None | None | I |
D/L | 0.9052 | likely_pathogenic | 0.9036 | pathogenic | 0.517 | Stabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | I |
D/M | 0.9548 | likely_pathogenic | 0.9516 | pathogenic | 0.935 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
D/N | 0.4045 | ambiguous | 0.3954 | ambiguous | -1.042 | Destabilizing | 0.989 | D | 0.551 | neutral | N | 0.426737369 | None | None | I |
D/P | 0.9979 | likely_pathogenic | 0.9977 | pathogenic | 0.192 | Stabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | I |
D/Q | 0.8327 | likely_pathogenic | 0.818 | pathogenic | -0.858 | Destabilizing | 0.995 | D | 0.591 | neutral | None | None | None | None | I |
D/R | 0.915 | likely_pathogenic | 0.9093 | pathogenic | -0.423 | Destabilizing | 0.995 | D | 0.706 | prob.neutral | None | None | None | None | I |
D/S | 0.5389 | ambiguous | 0.5368 | ambiguous | -1.367 | Destabilizing | 0.983 | D | 0.483 | neutral | None | None | None | None | I |
D/T | 0.7179 | likely_pathogenic | 0.696 | pathogenic | -1.037 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | I |
D/V | 0.7906 | likely_pathogenic | 0.7684 | pathogenic | 0.192 | Stabilizing | 0.997 | D | 0.725 | prob.delet. | N | 0.415405654 | None | None | I |
D/W | 0.9907 | likely_pathogenic | 0.9901 | pathogenic | 0.115 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
D/Y | 0.818 | likely_pathogenic | 0.8085 | pathogenic | 0.209 | Stabilizing | 1.0 | D | 0.741 | deleterious | N | 0.468624064 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.