Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19183 | 57772;57773;57774 | chr2:178595807;178595806;178595805 | chr2:179460534;179460533;179460532 |
N2AB | 17542 | 52849;52850;52851 | chr2:178595807;178595806;178595805 | chr2:179460534;179460533;179460532 |
N2A | 16615 | 50068;50069;50070 | chr2:178595807;178595806;178595805 | chr2:179460534;179460533;179460532 |
N2B | 10118 | 30577;30578;30579 | chr2:178595807;178595806;178595805 | chr2:179460534;179460533;179460532 |
Novex-1 | 10243 | 30952;30953;30954 | chr2:178595807;178595806;178595805 | chr2:179460534;179460533;179460532 |
Novex-2 | 10310 | 31153;31154;31155 | chr2:178595807;178595806;178595805 | chr2:179460534;179460533;179460532 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.997 | N | 0.463 | 0.25 | 0.53099781502 | gnomAD-4.0.0 | 6.94541E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0801E-07 | 0 | 0 |
V/I | None | None | 0.994 | N | 0.523 | 0.264 | 0.451023696535 | gnomAD-4.0.0 | 1.64899E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.53036E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3796 | ambiguous | 0.4122 | ambiguous | -0.705 | Destabilizing | 0.997 | D | 0.463 | neutral | N | 0.451840546 | None | None | I |
V/C | 0.8057 | likely_pathogenic | 0.8274 | pathogenic | -0.75 | Destabilizing | 1.0 | D | 0.699 | prob.delet. | None | None | None | None | I |
V/D | 0.8639 | likely_pathogenic | 0.8821 | pathogenic | -0.246 | Destabilizing | 0.999 | D | 0.806 | deleterious | N | 0.488697847 | None | None | I |
V/E | 0.642 | likely_pathogenic | 0.6981 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
V/F | 0.4802 | ambiguous | 0.5191 | ambiguous | -0.953 | Destabilizing | 0.999 | D | 0.691 | prob.delet. | N | 0.477088052 | None | None | I |
V/G | 0.6164 | likely_pathogenic | 0.654 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.755 | deleterious | N | 0.488444357 | None | None | I |
V/H | 0.8347 | likely_pathogenic | 0.8607 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
V/I | 0.0879 | likely_benign | 0.0901 | benign | -0.483 | Destabilizing | 0.994 | D | 0.523 | neutral | N | 0.510618962 | None | None | I |
V/K | 0.491 | ambiguous | 0.5503 | ambiguous | -0.347 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
V/L | 0.4829 | ambiguous | 0.4992 | ambiguous | -0.483 | Destabilizing | 0.994 | D | 0.514 | neutral | N | 0.45398014 | None | None | I |
V/M | 0.2775 | likely_benign | 0.3165 | benign | -0.362 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
V/N | 0.6396 | likely_pathogenic | 0.6753 | pathogenic | -0.135 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
V/P | 0.8535 | likely_pathogenic | 0.8438 | pathogenic | -0.522 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
V/Q | 0.5428 | ambiguous | 0.5793 | pathogenic | -0.424 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | I |
V/R | 0.4464 | ambiguous | 0.483 | ambiguous | 0.157 | Stabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
V/S | 0.4571 | ambiguous | 0.5002 | ambiguous | -0.584 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
V/T | 0.2649 | likely_benign | 0.2959 | benign | -0.589 | Destabilizing | 0.998 | D | 0.697 | prob.delet. | None | None | None | None | I |
V/W | 0.9663 | likely_pathogenic | 0.9724 | pathogenic | -0.971 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
V/Y | 0.8518 | likely_pathogenic | 0.8716 | pathogenic | -0.652 | Destabilizing | 0.999 | D | 0.728 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.