Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19186 | 57781;57782;57783 | chr2:178595798;178595797;178595796 | chr2:179460525;179460524;179460523 |
N2AB | 17545 | 52858;52859;52860 | chr2:178595798;178595797;178595796 | chr2:179460525;179460524;179460523 |
N2A | 16618 | 50077;50078;50079 | chr2:178595798;178595797;178595796 | chr2:179460525;179460524;179460523 |
N2B | 10121 | 30586;30587;30588 | chr2:178595798;178595797;178595796 | chr2:179460525;179460524;179460523 |
Novex-1 | 10246 | 30961;30962;30963 | chr2:178595798;178595797;178595796 | chr2:179460525;179460524;179460523 |
Novex-2 | 10313 | 31162;31163;31164 | chr2:178595798;178595797;178595796 | chr2:179460525;179460524;179460523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.839 | 0.432 | 0.493628743246 | gnomAD-4.0.0 | 1.38175E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1064 | likely_benign | 0.1094 | benign | -1.042 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.464515022 | None | None | I |
P/C | 0.5769 | likely_pathogenic | 0.6335 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | I |
P/D | 0.6774 | likely_pathogenic | 0.7157 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
P/E | 0.3947 | ambiguous | 0.4262 | ambiguous | -0.748 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
P/F | 0.643 | likely_pathogenic | 0.6892 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | I |
P/G | 0.5457 | ambiguous | 0.5629 | ambiguous | -1.261 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
P/H | 0.293 | likely_benign | 0.3302 | benign | -0.815 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.499552352 | None | None | I |
P/I | 0.4245 | ambiguous | 0.474 | ambiguous | -0.582 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | I |
P/K | 0.3198 | likely_benign | 0.3715 | ambiguous | -0.814 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
P/L | 0.2135 | likely_benign | 0.2363 | benign | -0.582 | Destabilizing | 1.0 | D | 0.891 | deleterious | N | 0.498031415 | None | None | I |
P/M | 0.413 | ambiguous | 0.4464 | ambiguous | -0.436 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
P/N | 0.5337 | ambiguous | 0.5668 | pathogenic | -0.484 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | I |
P/Q | 0.2149 | likely_benign | 0.2347 | benign | -0.738 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
P/R | 0.1912 | likely_benign | 0.2344 | benign | -0.268 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.487435578 | None | None | I |
P/S | 0.2275 | likely_benign | 0.2394 | benign | -0.936 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.497777925 | None | None | I |
P/T | 0.198 | likely_benign | 0.2153 | benign | -0.911 | Destabilizing | 1.0 | D | 0.836 | deleterious | N | 0.498538394 | None | None | I |
P/V | 0.2806 | likely_benign | 0.3096 | benign | -0.699 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
P/W | 0.8286 | likely_pathogenic | 0.865 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
P/Y | 0.6423 | likely_pathogenic | 0.702 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.93 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.