Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19191 | 57796;57797;57798 | chr2:178595783;178595782;178595781 | chr2:179460510;179460509;179460508 |
N2AB | 17550 | 52873;52874;52875 | chr2:178595783;178595782;178595781 | chr2:179460510;179460509;179460508 |
N2A | 16623 | 50092;50093;50094 | chr2:178595783;178595782;178595781 | chr2:179460510;179460509;179460508 |
N2B | 10126 | 30601;30602;30603 | chr2:178595783;178595782;178595781 | chr2:179460510;179460509;179460508 |
Novex-1 | 10251 | 30976;30977;30978 | chr2:178595783;178595782;178595781 | chr2:179460510;179460509;179460508 |
Novex-2 | 10318 | 31177;31178;31179 | chr2:178595783;178595782;178595781 | chr2:179460510;179460509;179460508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.046 | N | 0.384 | 0.225 | 0.255777322467 | gnomAD-4.0.0 | 6.87617E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02144E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9586 | likely_pathogenic | 0.974 | pathogenic | -2.497 | Highly Destabilizing | 0.953 | D | 0.734 | prob.delet. | None | None | None | None | N |
F/C | 0.7892 | likely_pathogenic | 0.8613 | pathogenic | -1.431 | Destabilizing | 0.999 | D | 0.79 | deleterious | N | 0.498698175 | None | None | N |
F/D | 0.9925 | likely_pathogenic | 0.9959 | pathogenic | -3.258 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
F/E | 0.9926 | likely_pathogenic | 0.9953 | pathogenic | -3.03 | Highly Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
F/G | 0.9846 | likely_pathogenic | 0.991 | pathogenic | -2.954 | Highly Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
F/H | 0.9683 | likely_pathogenic | 0.9817 | pathogenic | -1.76 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
F/I | 0.3554 | ambiguous | 0.3946 | ambiguous | -1.004 | Destabilizing | 0.885 | D | 0.687 | prob.neutral | N | 0.413444705 | None | None | N |
F/K | 0.9927 | likely_pathogenic | 0.9953 | pathogenic | -1.85 | Destabilizing | 0.993 | D | 0.816 | deleterious | None | None | None | None | N |
F/L | 0.8714 | likely_pathogenic | 0.893 | pathogenic | -1.004 | Destabilizing | 0.046 | N | 0.384 | neutral | N | 0.405017223 | None | None | N |
F/M | 0.7607 | likely_pathogenic | 0.7818 | pathogenic | -0.781 | Destabilizing | 0.986 | D | 0.735 | prob.delet. | None | None | None | None | N |
F/N | 0.9798 | likely_pathogenic | 0.9867 | pathogenic | -2.433 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
F/P | 0.9889 | likely_pathogenic | 0.9936 | pathogenic | -1.514 | Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
F/Q | 0.9872 | likely_pathogenic | 0.9915 | pathogenic | -2.308 | Highly Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
F/R | 0.9833 | likely_pathogenic | 0.9898 | pathogenic | -1.586 | Destabilizing | 0.993 | D | 0.848 | deleterious | None | None | None | None | N |
F/S | 0.9588 | likely_pathogenic | 0.9776 | pathogenic | -2.951 | Highly Destabilizing | 0.991 | D | 0.751 | deleterious | N | 0.504679998 | None | None | N |
F/T | 0.9609 | likely_pathogenic | 0.9754 | pathogenic | -2.605 | Highly Destabilizing | 0.993 | D | 0.75 | deleterious | None | None | None | None | N |
F/V | 0.4544 | ambiguous | 0.5155 | ambiguous | -1.514 | Destabilizing | 0.885 | D | 0.677 | prob.neutral | N | 0.429528879 | None | None | N |
F/W | 0.8072 | likely_pathogenic | 0.8592 | pathogenic | -0.109 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/Y | 0.5121 | ambiguous | 0.5973 | pathogenic | -0.485 | Destabilizing | 0.969 | D | 0.581 | neutral | N | 0.505720148 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.