Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1919257799;57800;57801 chr2:178595780;178595779;178595778chr2:179460507;179460506;179460505
N2AB1755152876;52877;52878 chr2:178595780;178595779;178595778chr2:179460507;179460506;179460505
N2A1662450095;50096;50097 chr2:178595780;178595779;178595778chr2:179460507;179460506;179460505
N2B1012730604;30605;30606 chr2:178595780;178595779;178595778chr2:179460507;179460506;179460505
Novex-11025230979;30980;30981 chr2:178595780;178595779;178595778chr2:179460507;179460506;179460505
Novex-21031931180;31181;31182 chr2:178595780;178595779;178595778chr2:179460507;179460506;179460505
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Fn3-27
  • Domain position: 10
  • Structural Position: 11
  • Q(SASA): 0.435
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs1338687639 None 0.295 N 0.599 0.213 0.576807342058 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/P rs1338687639 None 0.295 N 0.599 0.213 0.576807342058 gnomAD-4.0.0 1.86659E-06 None None None None I None 0 0 None 0 0 None 0 0 2.54908E-06 0 0
L/V None None 0.001 N 0.218 0.064 0.342400092842 gnomAD-4.0.0 4.82498E-06 None None None None I None 0 0 None 0 0 None 0 0 8.64788E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.105 likely_benign 0.1023 benign -1.252 Destabilizing None N 0.281 neutral None None None None I
L/C 0.28 likely_benign 0.2981 benign -0.505 Destabilizing 0.864 D 0.534 neutral None None None None I
L/D 0.3544 ambiguous 0.3661 ambiguous -0.742 Destabilizing 0.072 N 0.564 neutral None None None None I
L/E 0.1367 likely_benign 0.1418 benign -0.754 Destabilizing 0.038 N 0.485 neutral None None None None I
L/F 0.0902 likely_benign 0.0916 benign -0.891 Destabilizing 0.356 N 0.501 neutral None None None None I
L/G 0.3105 likely_benign 0.3316 benign -1.536 Destabilizing 0.031 N 0.463 neutral None None None None I
L/H 0.0879 likely_benign 0.0975 benign -0.752 Destabilizing 0.001 N 0.411 neutral None None None None I
L/I 0.0679 likely_benign 0.0659 benign -0.559 Destabilizing 0.029 N 0.37 neutral N 0.427491438 None None I
L/K 0.1203 likely_benign 0.1244 benign -0.717 Destabilizing 0.016 N 0.473 neutral None None None None I
L/M 0.0884 likely_benign 0.0816 benign -0.431 Destabilizing 0.356 N 0.484 neutral None None None None I
L/N 0.1896 likely_benign 0.1867 benign -0.465 Destabilizing 0.072 N 0.553 neutral None None None None I
L/P 0.6472 likely_pathogenic 0.7562 pathogenic -0.758 Destabilizing 0.295 N 0.599 neutral N 0.455968905 None None I
L/Q 0.0702 likely_benign 0.0704 benign -0.637 Destabilizing None N 0.413 neutral N 0.397787394 None None I
L/R 0.0976 likely_benign 0.1076 benign -0.168 Destabilizing None N 0.419 neutral N 0.399942264 None None I
L/S 0.1052 likely_benign 0.1045 benign -0.985 Destabilizing 0.001 N 0.353 neutral None None None None I
L/T 0.084 likely_benign 0.0801 benign -0.883 Destabilizing 0.016 N 0.435 neutral None None None None I
L/V 0.0653 likely_benign 0.0632 benign -0.758 Destabilizing 0.001 N 0.218 neutral N 0.394357512 None None I
L/W 0.1876 likely_benign 0.2121 benign -0.969 Destabilizing 0.864 D 0.551 neutral None None None None I
L/Y 0.2057 likely_benign 0.2085 benign -0.732 Destabilizing 0.214 N 0.613 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.