Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19192 | 57799;57800;57801 | chr2:178595780;178595779;178595778 | chr2:179460507;179460506;179460505 |
N2AB | 17551 | 52876;52877;52878 | chr2:178595780;178595779;178595778 | chr2:179460507;179460506;179460505 |
N2A | 16624 | 50095;50096;50097 | chr2:178595780;178595779;178595778 | chr2:179460507;179460506;179460505 |
N2B | 10127 | 30604;30605;30606 | chr2:178595780;178595779;178595778 | chr2:179460507;179460506;179460505 |
Novex-1 | 10252 | 30979;30980;30981 | chr2:178595780;178595779;178595778 | chr2:179460507;179460506;179460505 |
Novex-2 | 10319 | 31180;31181;31182 | chr2:178595780;178595779;178595778 | chr2:179460507;179460506;179460505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1338687639 | None | 0.295 | N | 0.599 | 0.213 | 0.576807342058 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs1338687639 | None | 0.295 | N | 0.599 | 0.213 | 0.576807342058 | gnomAD-4.0.0 | 1.86659E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54908E-06 | 0 | 0 |
L/V | None | None | 0.001 | N | 0.218 | 0.064 | 0.342400092842 | gnomAD-4.0.0 | 4.82498E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.64788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.105 | likely_benign | 0.1023 | benign | -1.252 | Destabilizing | None | N | 0.281 | neutral | None | None | None | None | I |
L/C | 0.28 | likely_benign | 0.2981 | benign | -0.505 | Destabilizing | 0.864 | D | 0.534 | neutral | None | None | None | None | I |
L/D | 0.3544 | ambiguous | 0.3661 | ambiguous | -0.742 | Destabilizing | 0.072 | N | 0.564 | neutral | None | None | None | None | I |
L/E | 0.1367 | likely_benign | 0.1418 | benign | -0.754 | Destabilizing | 0.038 | N | 0.485 | neutral | None | None | None | None | I |
L/F | 0.0902 | likely_benign | 0.0916 | benign | -0.891 | Destabilizing | 0.356 | N | 0.501 | neutral | None | None | None | None | I |
L/G | 0.3105 | likely_benign | 0.3316 | benign | -1.536 | Destabilizing | 0.031 | N | 0.463 | neutral | None | None | None | None | I |
L/H | 0.0879 | likely_benign | 0.0975 | benign | -0.752 | Destabilizing | 0.001 | N | 0.411 | neutral | None | None | None | None | I |
L/I | 0.0679 | likely_benign | 0.0659 | benign | -0.559 | Destabilizing | 0.029 | N | 0.37 | neutral | N | 0.427491438 | None | None | I |
L/K | 0.1203 | likely_benign | 0.1244 | benign | -0.717 | Destabilizing | 0.016 | N | 0.473 | neutral | None | None | None | None | I |
L/M | 0.0884 | likely_benign | 0.0816 | benign | -0.431 | Destabilizing | 0.356 | N | 0.484 | neutral | None | None | None | None | I |
L/N | 0.1896 | likely_benign | 0.1867 | benign | -0.465 | Destabilizing | 0.072 | N | 0.553 | neutral | None | None | None | None | I |
L/P | 0.6472 | likely_pathogenic | 0.7562 | pathogenic | -0.758 | Destabilizing | 0.295 | N | 0.599 | neutral | N | 0.455968905 | None | None | I |
L/Q | 0.0702 | likely_benign | 0.0704 | benign | -0.637 | Destabilizing | None | N | 0.413 | neutral | N | 0.397787394 | None | None | I |
L/R | 0.0976 | likely_benign | 0.1076 | benign | -0.168 | Destabilizing | None | N | 0.419 | neutral | N | 0.399942264 | None | None | I |
L/S | 0.1052 | likely_benign | 0.1045 | benign | -0.985 | Destabilizing | 0.001 | N | 0.353 | neutral | None | None | None | None | I |
L/T | 0.084 | likely_benign | 0.0801 | benign | -0.883 | Destabilizing | 0.016 | N | 0.435 | neutral | None | None | None | None | I |
L/V | 0.0653 | likely_benign | 0.0632 | benign | -0.758 | Destabilizing | 0.001 | N | 0.218 | neutral | N | 0.394357512 | None | None | I |
L/W | 0.1876 | likely_benign | 0.2121 | benign | -0.969 | Destabilizing | 0.864 | D | 0.551 | neutral | None | None | None | None | I |
L/Y | 0.2057 | likely_benign | 0.2085 | benign | -0.732 | Destabilizing | 0.214 | N | 0.613 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.