Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19197 | 57814;57815;57816 | chr2:178595765;178595764;178595763 | chr2:179460492;179460491;179460490 |
N2AB | 17556 | 52891;52892;52893 | chr2:178595765;178595764;178595763 | chr2:179460492;179460491;179460490 |
N2A | 16629 | 50110;50111;50112 | chr2:178595765;178595764;178595763 | chr2:179460492;179460491;179460490 |
N2B | 10132 | 30619;30620;30621 | chr2:178595765;178595764;178595763 | chr2:179460492;179460491;179460490 |
Novex-1 | 10257 | 30994;30995;30996 | chr2:178595765;178595764;178595763 | chr2:179460492;179460491;179460490 |
Novex-2 | 10324 | 31195;31196;31197 | chr2:178595765;178595764;178595763 | chr2:179460492;179460491;179460490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.808 | 0.461 | 0.45470266194 | gnomAD-4.0.0 | 6.86581E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01203E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2436 | likely_benign | 0.2919 | benign | -0.86 | Destabilizing | 0.999 | D | 0.537 | neutral | N | 0.472817724 | None | None | N |
T/C | 0.6791 | likely_pathogenic | 0.6633 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
T/D | 0.4498 | ambiguous | 0.554 | ambiguous | -0.797 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
T/E | 0.6003 | likely_pathogenic | 0.706 | pathogenic | -0.781 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
T/F | 0.6678 | likely_pathogenic | 0.7579 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
T/G | 0.3045 | likely_benign | 0.3615 | ambiguous | -1.131 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
T/H | 0.4803 | ambiguous | 0.5303 | ambiguous | -1.418 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/I | 0.6494 | likely_pathogenic | 0.7245 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.492024843 | None | None | N |
T/K | 0.4697 | ambiguous | 0.5599 | ambiguous | -0.862 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
T/L | 0.3045 | likely_benign | 0.3711 | ambiguous | -0.22 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/M | 0.2368 | likely_benign | 0.2826 | benign | 0.119 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/N | 0.1435 | likely_benign | 0.1648 | benign | -0.926 | Destabilizing | 1.0 | D | 0.794 | deleterious | N | 0.51719351 | None | None | N |
T/P | 0.6443 | likely_pathogenic | 0.7744 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.507166583 | None | None | N |
T/Q | 0.3996 | ambiguous | 0.4707 | ambiguous | -1.127 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
T/R | 0.4278 | ambiguous | 0.5174 | ambiguous | -0.586 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
T/S | 0.1209 | likely_benign | 0.1334 | benign | -1.15 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.465956613 | None | None | N |
T/V | 0.4997 | ambiguous | 0.548 | ambiguous | -0.401 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
T/W | 0.8708 | likely_pathogenic | 0.9076 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/Y | 0.6778 | likely_pathogenic | 0.7379 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.