Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19199 | 57820;57821;57822 | chr2:178595759;178595758;178595757 | chr2:179460486;179460485;179460484 |
N2AB | 17558 | 52897;52898;52899 | chr2:178595759;178595758;178595757 | chr2:179460486;179460485;179460484 |
N2A | 16631 | 50116;50117;50118 | chr2:178595759;178595758;178595757 | chr2:179460486;179460485;179460484 |
N2B | 10134 | 30625;30626;30627 | chr2:178595759;178595758;178595757 | chr2:179460486;179460485;179460484 |
Novex-1 | 10259 | 31000;31001;31002 | chr2:178595759;178595758;178595757 | chr2:179460486;179460485;179460484 |
Novex-2 | 10326 | 31201;31202;31203 | chr2:178595759;178595758;178595757 | chr2:179460486;179460485;179460484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.024 | N | 0.274 | 0.204 | 0.239901079897 | gnomAD-4.0.0 | 1.60333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87469E-06 | 0 | 0 |
E/V | rs2051391133 | None | 0.106 | N | 0.428 | 0.253 | 0.31077124679 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/V | rs2051391133 | None | 0.106 | N | 0.428 | 0.253 | 0.31077124679 | gnomAD-4.0.0 | 6.5767E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47063E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1775 | likely_benign | 0.2271 | benign | -0.651 | Destabilizing | 0.024 | N | 0.343 | neutral | N | 0.472189152 | None | None | N |
E/C | 0.7828 | likely_pathogenic | 0.8578 | pathogenic | -0.003 | Destabilizing | 0.864 | D | 0.328 | neutral | None | None | None | None | N |
E/D | 0.0486 | likely_benign | 0.0594 | benign | -0.559 | Destabilizing | None | N | 0.057 | neutral | N | 0.377084047 | None | None | N |
E/F | 0.7063 | likely_pathogenic | 0.8138 | pathogenic | -0.628 | Destabilizing | 0.628 | D | 0.378 | neutral | None | None | None | None | N |
E/G | 0.1487 | likely_benign | 0.2076 | benign | -0.88 | Destabilizing | 0.024 | N | 0.306 | neutral | N | 0.463761669 | None | None | N |
E/H | 0.4224 | ambiguous | 0.5154 | ambiguous | -0.725 | Destabilizing | 0.356 | N | 0.355 | neutral | None | None | None | None | N |
E/I | 0.4414 | ambiguous | 0.5278 | ambiguous | -0.069 | Destabilizing | 0.356 | N | 0.403 | neutral | None | None | None | None | N |
E/K | 0.2542 | likely_benign | 0.3106 | benign | 0.118 | Stabilizing | 0.024 | N | 0.274 | neutral | N | 0.453083316 | None | None | N |
E/L | 0.4594 | ambiguous | 0.5669 | pathogenic | -0.069 | Destabilizing | 0.072 | N | 0.436 | neutral | None | None | None | None | N |
E/M | 0.5527 | ambiguous | 0.631 | pathogenic | 0.315 | Stabilizing | 0.864 | D | 0.315 | neutral | None | None | None | None | N |
E/N | 0.1287 | likely_benign | 0.1794 | benign | -0.164 | Destabilizing | 0.016 | N | 0.249 | neutral | None | None | None | None | N |
E/P | 0.8738 | likely_pathogenic | 0.9269 | pathogenic | -0.243 | Destabilizing | 0.136 | N | 0.401 | neutral | None | None | None | None | N |
E/Q | 0.2023 | likely_benign | 0.2309 | benign | -0.143 | Destabilizing | 0.055 | N | 0.289 | neutral | N | 0.476498893 | None | None | N |
E/R | 0.3783 | ambiguous | 0.4547 | ambiguous | 0.193 | Stabilizing | 0.072 | N | 0.355 | neutral | None | None | None | None | N |
E/S | 0.1484 | likely_benign | 0.1925 | benign | -0.362 | Destabilizing | 0.016 | N | 0.295 | neutral | None | None | None | None | N |
E/T | 0.1759 | likely_benign | 0.2398 | benign | -0.176 | Destabilizing | 0.072 | N | 0.335 | neutral | None | None | None | None | N |
E/V | 0.2858 | likely_benign | 0.3585 | ambiguous | -0.243 | Destabilizing | 0.106 | N | 0.428 | neutral | N | 0.513843773 | None | None | N |
E/W | 0.8974 | likely_pathogenic | 0.936 | pathogenic | -0.476 | Destabilizing | 0.864 | D | 0.417 | neutral | None | None | None | None | N |
E/Y | 0.4844 | ambiguous | 0.6059 | pathogenic | -0.384 | Destabilizing | 0.628 | D | 0.362 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.