Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19200 | 57823;57824;57825 | chr2:178595756;178595755;178595754 | chr2:179460483;179460482;179460481 |
N2AB | 17559 | 52900;52901;52902 | chr2:178595756;178595755;178595754 | chr2:179460483;179460482;179460481 |
N2A | 16632 | 50119;50120;50121 | chr2:178595756;178595755;178595754 | chr2:179460483;179460482;179460481 |
N2B | 10135 | 30628;30629;30630 | chr2:178595756;178595755;178595754 | chr2:179460483;179460482;179460481 |
Novex-1 | 10260 | 31003;31004;31005 | chr2:178595756;178595755;178595754 | chr2:179460483;179460482;179460481 |
Novex-2 | 10327 | 31204;31205;31206 | chr2:178595756;178595755;178595754 | chr2:179460483;179460482;179460481 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 1.0 | N | 0.86 | 0.483 | 0.571693661435 | gnomAD-4.0.0 | 1.60272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45921E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1172 | likely_benign | 0.1186 | benign | -0.519 | Destabilizing | 0.997 | D | 0.485 | neutral | N | 0.475645789 | None | None | N |
S/C | 0.1465 | likely_benign | 0.1488 | benign | -0.814 | Destabilizing | 1.0 | D | 0.804 | deleterious | N | 0.485409159 | None | None | N |
S/D | 0.6364 | likely_pathogenic | 0.6833 | pathogenic | -1.843 | Destabilizing | 0.999 | D | 0.538 | neutral | None | None | None | None | N |
S/E | 0.7139 | likely_pathogenic | 0.7504 | pathogenic | -1.772 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | N |
S/F | 0.2543 | likely_benign | 0.268 | benign | -0.713 | Destabilizing | 1.0 | D | 0.86 | deleterious | N | 0.497664064 | None | None | N |
S/G | 0.1501 | likely_benign | 0.161 | benign | -0.791 | Destabilizing | 0.999 | D | 0.505 | neutral | None | None | None | None | N |
S/H | 0.4482 | ambiguous | 0.4735 | ambiguous | -1.297 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
S/I | 0.3312 | likely_benign | 0.348 | ambiguous | 0.111 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
S/K | 0.8555 | likely_pathogenic | 0.8812 | pathogenic | -0.707 | Destabilizing | 0.999 | D | 0.528 | neutral | None | None | None | None | N |
S/L | 0.1812 | likely_benign | 0.1908 | benign | 0.111 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
S/M | 0.236 | likely_benign | 0.2271 | benign | 0.259 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
S/N | 0.2005 | likely_benign | 0.1991 | benign | -1.179 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
S/P | 0.9747 | likely_pathogenic | 0.985 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.529757971 | None | None | N |
S/Q | 0.6406 | likely_pathogenic | 0.6517 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
S/R | 0.8186 | likely_pathogenic | 0.8486 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/T | 0.0871 | likely_benign | 0.0886 | benign | -0.877 | Destabilizing | 0.999 | D | 0.499 | neutral | N | 0.48997241 | None | None | N |
S/V | 0.3039 | likely_benign | 0.3115 | benign | -0.065 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
S/W | 0.5271 | ambiguous | 0.5736 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/Y | 0.2351 | likely_benign | 0.2567 | benign | -0.488 | Destabilizing | 1.0 | D | 0.868 | deleterious | N | 0.477887514 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.