Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19204 | 57835;57836;57837 | chr2:178595744;178595743;178595742 | chr2:179460471;179460470;179460469 |
N2AB | 17563 | 52912;52913;52914 | chr2:178595744;178595743;178595742 | chr2:179460471;179460470;179460469 |
N2A | 16636 | 50131;50132;50133 | chr2:178595744;178595743;178595742 | chr2:179460471;179460470;179460469 |
N2B | 10139 | 30640;30641;30642 | chr2:178595744;178595743;178595742 | chr2:179460471;179460470;179460469 |
Novex-1 | 10264 | 31015;31016;31017 | chr2:178595744;178595743;178595742 | chr2:179460471;179460470;179460469 |
Novex-2 | 10331 | 31216;31217;31218 | chr2:178595744;178595743;178595742 | chr2:179460471;179460470;179460469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.997 | N | 0.777 | 0.448 | 0.512021964565 | gnomAD-4.0.0 | 6.8612E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00812E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1174 | likely_benign | 0.1095 | benign | -0.814 | Destabilizing | 0.898 | D | 0.542 | neutral | N | 0.470092996 | None | None | N |
T/C | 0.4653 | ambiguous | 0.4192 | ambiguous | -0.545 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
T/D | 0.5392 | ambiguous | 0.5185 | ambiguous | -1.838 | Destabilizing | 0.995 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/E | 0.4536 | ambiguous | 0.4297 | ambiguous | -1.584 | Destabilizing | 0.995 | D | 0.671 | neutral | None | None | None | None | N |
T/F | 0.3196 | likely_benign | 0.2927 | benign | -0.422 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
T/G | 0.3504 | ambiguous | 0.3151 | benign | -1.236 | Destabilizing | 0.966 | D | 0.587 | neutral | None | None | None | None | N |
T/H | 0.3154 | likely_benign | 0.2935 | benign | -1.408 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
T/I | 0.2149 | likely_benign | 0.2115 | benign | 0.32 | Stabilizing | 0.997 | D | 0.768 | deleterious | N | 0.518174944 | None | None | N |
T/K | 0.432 | ambiguous | 0.3994 | ambiguous | -0.327 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | N | 0.466783332 | None | None | N |
T/L | 0.1294 | likely_benign | 0.1247 | benign | 0.32 | Stabilizing | 0.983 | D | 0.575 | neutral | None | None | None | None | N |
T/M | 0.1057 | likely_benign | 0.1045 | benign | 0.037 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
T/N | 0.1456 | likely_benign | 0.1371 | benign | -1.246 | Destabilizing | 0.995 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/P | 0.7115 | likely_pathogenic | 0.708 | pathogenic | -0.03 | Destabilizing | 0.997 | D | 0.777 | deleterious | N | 0.492755177 | None | None | N |
T/Q | 0.3008 | likely_benign | 0.2848 | benign | -0.816 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
T/R | 0.3442 | ambiguous | 0.3237 | benign | -0.79 | Destabilizing | 0.993 | D | 0.769 | deleterious | N | 0.467071334 | None | None | N |
T/S | 0.1128 | likely_benign | 0.1032 | benign | -1.339 | Destabilizing | 0.362 | N | 0.439 | neutral | N | 0.400150121 | None | None | N |
T/V | 0.1769 | likely_benign | 0.1713 | benign | -0.03 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
T/W | 0.7007 | likely_pathogenic | 0.6483 | pathogenic | -0.862 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
T/Y | 0.3568 | ambiguous | 0.3146 | benign | -0.36 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.