Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19215 | 57868;57869;57870 | chr2:178595711;178595710;178595709 | chr2:179460438;179460437;179460436 |
N2AB | 17574 | 52945;52946;52947 | chr2:178595711;178595710;178595709 | chr2:179460438;179460437;179460436 |
N2A | 16647 | 50164;50165;50166 | chr2:178595711;178595710;178595709 | chr2:179460438;179460437;179460436 |
N2B | 10150 | 30673;30674;30675 | chr2:178595711;178595710;178595709 | chr2:179460438;179460437;179460436 |
Novex-1 | 10275 | 31048;31049;31050 | chr2:178595711;178595710;178595709 | chr2:179460438;179460437;179460436 |
Novex-2 | 10342 | 31249;31250;31251 | chr2:178595711;178595710;178595709 | chr2:179460438;179460437;179460436 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs776531074 | 0.017 | 0.193 | N | 0.393 | 0.245 | 0.208000267992 | gnomAD-2.1.1 | 4.17E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.21E-06 | 0 |
P/S | rs776531074 | 0.017 | 0.193 | N | 0.393 | 0.245 | 0.208000267992 | gnomAD-4.0.0 | 1.60373E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87527E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0736 | likely_benign | 0.08 | benign | -0.399 | Destabilizing | None | N | 0.135 | neutral | N | 0.46995971 | None | None | I |
P/C | 0.5487 | ambiguous | 0.6387 | pathogenic | -0.576 | Destabilizing | 0.944 | D | 0.499 | neutral | None | None | None | None | I |
P/D | 0.5549 | ambiguous | 0.6439 | pathogenic | -0.142 | Destabilizing | 0.818 | D | 0.444 | neutral | None | None | None | None | I |
P/E | 0.3494 | ambiguous | 0.3932 | ambiguous | -0.268 | Destabilizing | 0.388 | N | 0.425 | neutral | None | None | None | None | I |
P/F | 0.5628 | ambiguous | 0.6859 | pathogenic | -0.764 | Destabilizing | 0.527 | D | 0.522 | neutral | None | None | None | None | I |
P/G | 0.3854 | ambiguous | 0.4435 | ambiguous | -0.504 | Destabilizing | 0.241 | N | 0.47 | neutral | None | None | None | None | I |
P/H | 0.2612 | likely_benign | 0.3074 | benign | -0.153 | Destabilizing | 0.981 | D | 0.498 | neutral | None | None | None | None | I |
P/I | 0.2886 | likely_benign | 0.3591 | ambiguous | -0.28 | Destabilizing | 0.241 | N | 0.474 | neutral | None | None | None | None | I |
P/K | 0.3793 | ambiguous | 0.4359 | ambiguous | -0.213 | Destabilizing | 0.388 | N | 0.435 | neutral | None | None | None | None | I |
P/L | 0.1343 | likely_benign | 0.1652 | benign | -0.28 | Destabilizing | 0.001 | N | 0.262 | neutral | N | 0.498074776 | None | None | I |
P/M | 0.2905 | likely_benign | 0.35 | ambiguous | -0.222 | Destabilizing | 0.69 | D | 0.501 | neutral | None | None | None | None | I |
P/N | 0.3547 | ambiguous | 0.4387 | ambiguous | 0.013 | Stabilizing | 0.818 | D | 0.529 | neutral | None | None | None | None | I |
P/Q | 0.182 | likely_benign | 0.1968 | benign | -0.256 | Destabilizing | 0.773 | D | 0.463 | neutral | N | 0.514211919 | None | None | I |
P/R | 0.2573 | likely_benign | 0.2936 | benign | 0.271 | Stabilizing | 0.773 | D | 0.529 | neutral | N | 0.474601696 | None | None | I |
P/S | 0.144 | likely_benign | 0.1694 | benign | -0.353 | Destabilizing | 0.193 | N | 0.393 | neutral | N | 0.476296763 | None | None | I |
P/T | 0.1145 | likely_benign | 0.1301 | benign | -0.379 | Destabilizing | 0.324 | N | 0.398 | neutral | N | 0.471118976 | None | None | I |
P/V | 0.1737 | likely_benign | 0.2132 | benign | -0.286 | Destabilizing | 0.241 | N | 0.469 | neutral | None | None | None | None | I |
P/W | 0.7713 | likely_pathogenic | 0.8483 | pathogenic | -0.827 | Destabilizing | 0.981 | D | 0.619 | neutral | None | None | None | None | I |
P/Y | 0.543 | ambiguous | 0.6588 | pathogenic | -0.498 | Destabilizing | 0.818 | D | 0.511 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.