Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1922 | 5989;5990;5991 | chr2:178776100;178776099;178776098 | chr2:179640827;179640826;179640825 |
N2AB | 1922 | 5989;5990;5991 | chr2:178776100;178776099;178776098 | chr2:179640827;179640826;179640825 |
N2A | 1922 | 5989;5990;5991 | chr2:178776100;178776099;178776098 | chr2:179640827;179640826;179640825 |
N2B | 1876 | 5851;5852;5853 | chr2:178776100;178776099;178776098 | chr2:179640827;179640826;179640825 |
Novex-1 | 1876 | 5851;5852;5853 | chr2:178776100;178776099;178776098 | chr2:179640827;179640826;179640825 |
Novex-2 | 1876 | 5851;5852;5853 | chr2:178776100;178776099;178776098 | chr2:179640827;179640826;179640825 |
Novex-3 | 1922 | 5989;5990;5991 | chr2:178776100;178776099;178776098 | chr2:179640827;179640826;179640825 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.577 | 0.514 | 0.405422107966 | gnomAD-4.0.0 | 6.84071E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99306E-07 | 0 | 0 |
E/Q | rs1349924695 | -0.491 | 1.0 | N | 0.641 | 0.381 | 0.423119698836 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
E/Q | rs1349924695 | -0.491 | 1.0 | N | 0.641 | 0.381 | 0.423119698836 | gnomAD-4.0.0 | 6.84071E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99306E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3533 | ambiguous | 0.4533 | ambiguous | -0.613 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.545787396 | None | None | I |
E/C | 0.9552 | likely_pathogenic | 0.9696 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
E/D | 0.3517 | ambiguous | 0.3384 | benign | -0.819 | Destabilizing | 0.999 | D | 0.5 | neutral | D | 0.564730031 | None | None | I |
E/F | 0.9588 | likely_pathogenic | 0.9717 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
E/G | 0.5686 | likely_pathogenic | 0.6783 | pathogenic | -0.929 | Destabilizing | 1.0 | D | 0.763 | deleterious | D | 0.686157184 | None | None | I |
E/H | 0.8295 | likely_pathogenic | 0.8824 | pathogenic | -0.009 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/I | 0.699 | likely_pathogenic | 0.769 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
E/K | 0.6516 | likely_pathogenic | 0.768 | pathogenic | -0.354 | Destabilizing | 0.999 | D | 0.577 | neutral | N | 0.516741885 | None | None | I |
E/L | 0.8322 | likely_pathogenic | 0.8778 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
E/M | 0.7945 | likely_pathogenic | 0.8498 | pathogenic | 0.355 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
E/N | 0.6681 | likely_pathogenic | 0.6957 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
E/P | 0.9849 | likely_pathogenic | 0.9922 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
E/Q | 0.3156 | likely_benign | 0.3782 | ambiguous | -0.748 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.516212575 | None | None | I |
E/R | 0.7743 | likely_pathogenic | 0.858 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/S | 0.3473 | ambiguous | 0.3926 | ambiguous | -1.088 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | I |
E/T | 0.3621 | ambiguous | 0.418 | ambiguous | -0.827 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
E/V | 0.4932 | ambiguous | 0.5723 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.521729827 | None | None | I |
E/W | 0.9886 | likely_pathogenic | 0.993 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
E/Y | 0.9377 | likely_pathogenic | 0.9594 | pathogenic | 0.218 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.