Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19222 | 57889;57890;57891 | chr2:178595690;178595689;178595688 | chr2:179460417;179460416;179460415 |
N2AB | 17581 | 52966;52967;52968 | chr2:178595690;178595689;178595688 | chr2:179460417;179460416;179460415 |
N2A | 16654 | 50185;50186;50187 | chr2:178595690;178595689;178595688 | chr2:179460417;179460416;179460415 |
N2B | 10157 | 30694;30695;30696 | chr2:178595690;178595689;178595688 | chr2:179460417;179460416;179460415 |
Novex-1 | 10282 | 31069;31070;31071 | chr2:178595690;178595689;178595688 | chr2:179460417;179460416;179460415 |
Novex-2 | 10349 | 31270;31271;31272 | chr2:178595690;178595689;178595688 | chr2:179460417;179460416;179460415 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.41 | N | 0.68 | 0.457 | 0.392855499163 | gnomAD-4.0.0 | 6.86457E-07 | None | None | None | None | N | None | 2.99133E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs572862573 | -2.764 | 0.83 | N | 0.781 | 0.475 | 0.48763082235 | gnomAD-2.1.1 | 7.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.16636E-04 | None | 0 | 0 | 3.39443E-04 |
E/G | rs572862573 | -2.764 | 0.83 | N | 0.781 | 0.475 | 0.48763082235 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
E/G | rs572862573 | -2.764 | 0.83 | N | 0.781 | 0.475 | 0.48763082235 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/G | rs572862573 | -2.764 | 0.83 | N | 0.781 | 0.475 | 0.48763082235 | gnomAD-4.0.0 | 2.85905E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.65125E-04 | 8.49117E-07 | 4.67873E-04 | 3.20821E-05 |
E/K | rs2051376296 | None | 0.41 | N | 0.673 | 0.256 | 0.263612267334 | gnomAD-4.0.0 | 6.86556E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01237E-07 | 0 | 0 |
E/V | rs572862573 | -1.177 | 0.83 | N | 0.808 | 0.497 | 0.619387179241 | gnomAD-2.1.1 | 4.16E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.19E-06 | 0 |
E/V | rs572862573 | -1.177 | 0.83 | N | 0.808 | 0.497 | 0.619387179241 | gnomAD-4.0.0 | 6.86457E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66041E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8809 | likely_pathogenic | 0.8918 | pathogenic | -0.864 | Destabilizing | 0.41 | N | 0.68 | prob.neutral | N | 0.520543443 | None | None | N |
E/C | 0.9836 | likely_pathogenic | 0.9854 | pathogenic | -0.111 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
E/D | 0.8507 | likely_pathogenic | 0.842 | pathogenic | -1.669 | Destabilizing | 0.581 | D | 0.623 | neutral | N | 0.483600917 | None | None | N |
E/F | 0.9917 | likely_pathogenic | 0.9932 | pathogenic | -0.615 | Destabilizing | 0.993 | D | 0.837 | deleterious | None | None | None | None | N |
E/G | 0.9192 | likely_pathogenic | 0.936 | pathogenic | -1.258 | Destabilizing | 0.83 | D | 0.781 | deleterious | N | 0.51079698 | None | None | N |
E/H | 0.9719 | likely_pathogenic | 0.972 | pathogenic | -0.501 | Destabilizing | 0.961 | D | 0.83 | deleterious | None | None | None | None | N |
E/I | 0.973 | likely_pathogenic | 0.9806 | pathogenic | 0.261 | Stabilizing | 0.929 | D | 0.841 | deleterious | None | None | None | None | N |
E/K | 0.925 | likely_pathogenic | 0.9313 | pathogenic | -0.802 | Destabilizing | 0.41 | N | 0.673 | neutral | N | 0.4963988 | None | None | N |
E/L | 0.9674 | likely_pathogenic | 0.9633 | pathogenic | 0.261 | Stabilizing | 0.866 | D | 0.818 | deleterious | None | None | None | None | N |
E/M | 0.9471 | likely_pathogenic | 0.9583 | pathogenic | 0.846 | Stabilizing | 0.98 | D | 0.831 | deleterious | None | None | None | None | N |
E/N | 0.97 | likely_pathogenic | 0.9688 | pathogenic | -1.165 | Destabilizing | 0.866 | D | 0.814 | deleterious | None | None | None | None | N |
E/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.099 | Destabilizing | 0.929 | D | 0.819 | deleterious | None | None | None | None | N |
E/Q | 0.4618 | ambiguous | 0.492 | ambiguous | -0.814 | Destabilizing | 0.01 | N | 0.375 | neutral | N | 0.510072749 | None | None | N |
E/R | 0.9441 | likely_pathogenic | 0.9488 | pathogenic | -0.837 | Destabilizing | 0.764 | D | 0.815 | deleterious | None | None | None | None | N |
E/S | 0.8872 | likely_pathogenic | 0.9047 | pathogenic | -1.681 | Destabilizing | 0.48 | N | 0.709 | prob.delet. | None | None | None | None | N |
E/T | 0.9537 | likely_pathogenic | 0.9655 | pathogenic | -1.292 | Destabilizing | 0.866 | D | 0.787 | deleterious | None | None | None | None | N |
E/V | 0.9334 | likely_pathogenic | 0.9504 | pathogenic | -0.099 | Destabilizing | 0.83 | D | 0.808 | deleterious | N | 0.514555961 | None | None | N |
E/W | 0.9958 | likely_pathogenic | 0.9969 | pathogenic | -0.829 | Destabilizing | 0.993 | D | 0.801 | deleterious | None | None | None | None | N |
E/Y | 0.9882 | likely_pathogenic | 0.9896 | pathogenic | -0.431 | Destabilizing | 0.929 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.