Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19237 | 57934;57935;57936 | chr2:178595645;178595644;178595643 | chr2:179460372;179460371;179460370 |
N2AB | 17596 | 53011;53012;53013 | chr2:178595645;178595644;178595643 | chr2:179460372;179460371;179460370 |
N2A | 16669 | 50230;50231;50232 | chr2:178595645;178595644;178595643 | chr2:179460372;179460371;179460370 |
N2B | 10172 | 30739;30740;30741 | chr2:178595645;178595644;178595643 | chr2:179460372;179460371;179460370 |
Novex-1 | 10297 | 31114;31115;31116 | chr2:178595645;178595644;178595643 | chr2:179460372;179460371;179460370 |
Novex-2 | 10364 | 31315;31316;31317 | chr2:178595645;178595644;178595643 | chr2:179460372;179460371;179460370 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.946 | N | 0.712 | 0.45 | 0.636979074746 | gnomAD-4.0.0 | 6.87372E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02039E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1284 | likely_benign | 0.141 | benign | -0.425 | Destabilizing | 0.834 | D | 0.432 | neutral | N | 0.503896138 | None | None | N |
T/C | 0.5549 | ambiguous | 0.5802 | pathogenic | -0.245 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/D | 0.5886 | likely_pathogenic | 0.6328 | pathogenic | 0.132 | Stabilizing | 0.921 | D | 0.672 | neutral | None | None | None | None | N |
T/E | 0.5457 | ambiguous | 0.6016 | pathogenic | 0.049 | Stabilizing | 0.959 | D | 0.671 | neutral | None | None | None | None | N |
T/F | 0.5419 | ambiguous | 0.6207 | pathogenic | -0.939 | Destabilizing | 0.993 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/G | 0.3286 | likely_benign | 0.3443 | ambiguous | -0.545 | Destabilizing | 0.769 | D | 0.616 | neutral | None | None | None | None | N |
T/H | 0.3947 | ambiguous | 0.4472 | ambiguous | -0.877 | Destabilizing | 0.989 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/I | 0.5376 | ambiguous | 0.5815 | pathogenic | -0.227 | Destabilizing | 0.973 | D | 0.711 | prob.delet. | N | 0.519020306 | None | None | N |
T/K | 0.4039 | ambiguous | 0.4739 | ambiguous | -0.352 | Destabilizing | 0.898 | D | 0.674 | neutral | N | 0.495930016 | None | None | N |
T/L | 0.2341 | likely_benign | 0.2727 | benign | -0.227 | Destabilizing | 0.87 | D | 0.615 | neutral | None | None | None | None | N |
T/M | 0.1471 | likely_benign | 0.1773 | benign | 0.042 | Stabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/N | 0.1973 | likely_benign | 0.2071 | benign | -0.127 | Destabilizing | 0.046 | N | 0.243 | neutral | None | None | None | None | N |
T/P | 0.4346 | ambiguous | 0.4486 | ambiguous | -0.265 | Destabilizing | 0.973 | D | 0.705 | prob.neutral | N | 0.498255458 | None | None | N |
T/Q | 0.3596 | ambiguous | 0.4005 | ambiguous | -0.395 | Destabilizing | 0.959 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/R | 0.3327 | likely_benign | 0.4227 | ambiguous | -0.069 | Destabilizing | 0.946 | D | 0.712 | prob.delet. | N | 0.489505476 | None | None | N |
T/S | 0.1466 | likely_benign | 0.1574 | benign | -0.345 | Destabilizing | 0.716 | D | 0.392 | neutral | N | 0.460603934 | None | None | N |
T/V | 0.3505 | ambiguous | 0.3825 | ambiguous | -0.265 | Destabilizing | 0.931 | D | 0.558 | neutral | None | None | None | None | N |
T/W | 0.8115 | likely_pathogenic | 0.8475 | pathogenic | -0.919 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
T/Y | 0.5396 | ambiguous | 0.6011 | pathogenic | -0.643 | Destabilizing | 0.993 | D | 0.732 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.