Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19239 | 57940;57941;57942 | chr2:178595639;178595638;178595637 | chr2:179460366;179460365;179460364 |
N2AB | 17598 | 53017;53018;53019 | chr2:178595639;178595638;178595637 | chr2:179460366;179460365;179460364 |
N2A | 16671 | 50236;50237;50238 | chr2:178595639;178595638;178595637 | chr2:179460366;179460365;179460364 |
N2B | 10174 | 30745;30746;30747 | chr2:178595639;178595638;178595637 | chr2:179460366;179460365;179460364 |
Novex-1 | 10299 | 31120;31121;31122 | chr2:178595639;178595638;178595637 | chr2:179460366;179460365;179460364 |
Novex-2 | 10366 | 31321;31322;31323 | chr2:178595639;178595638;178595637 | chr2:179460366;179460365;179460364 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.999 | N | 0.475 | 0.318 | 0.266843984389 | gnomAD-4.0.0 | 6.87783E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02426E-07 | 0 | 0 |
T/I | rs2051363006 | None | 1.0 | N | 0.638 | 0.46 | 0.510407551169 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
T/I | rs2051363006 | None | 1.0 | N | 0.638 | 0.46 | 0.510407551169 | gnomAD-4.0.0 | 1.24546E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.50303E-07 | 1.11864E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1572 | likely_benign | 0.1803 | benign | -0.607 | Destabilizing | 0.999 | D | 0.475 | neutral | N | 0.483062293 | None | None | I |
T/C | 0.5889 | likely_pathogenic | 0.6261 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.584 | neutral | None | None | None | None | I |
T/D | 0.7246 | likely_pathogenic | 0.7598 | pathogenic | 0.407 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
T/E | 0.6349 | likely_pathogenic | 0.681 | pathogenic | 0.363 | Stabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | I |
T/F | 0.5452 | ambiguous | 0.6167 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
T/G | 0.3332 | likely_benign | 0.3713 | ambiguous | -0.779 | Destabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | I |
T/H | 0.4842 | ambiguous | 0.535 | ambiguous | -0.988 | Destabilizing | 1.0 | D | 0.566 | neutral | None | None | None | None | I |
T/I | 0.4533 | ambiguous | 0.5196 | ambiguous | -0.263 | Destabilizing | 1.0 | D | 0.638 | neutral | N | 0.519023093 | None | None | I |
T/K | 0.4639 | ambiguous | 0.5419 | ambiguous | -0.411 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
T/L | 0.1991 | likely_benign | 0.2307 | benign | -0.263 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | I |
T/M | 0.152 | likely_benign | 0.1769 | benign | -0.159 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | I |
T/N | 0.2225 | likely_benign | 0.2518 | benign | -0.279 | Destabilizing | 1.0 | D | 0.674 | neutral | N | 0.496663522 | None | None | I |
T/P | 0.1838 | likely_benign | 0.2088 | benign | -0.348 | Destabilizing | 1.0 | D | 0.635 | neutral | N | 0.454702256 | None | None | I |
T/Q | 0.3847 | ambiguous | 0.4231 | ambiguous | -0.44 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
T/R | 0.4434 | ambiguous | 0.5325 | ambiguous | -0.177 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
T/S | 0.1666 | likely_benign | 0.1855 | benign | -0.572 | Destabilizing | 0.999 | D | 0.5 | neutral | N | 0.448640288 | None | None | I |
T/V | 0.3237 | likely_benign | 0.3666 | ambiguous | -0.348 | Destabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | I |
T/W | 0.8367 | likely_pathogenic | 0.8711 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
T/Y | 0.6162 | likely_pathogenic | 0.6778 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.