Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1924 | 5995;5996;5997 | chr2:178776094;178776093;178776092 | chr2:179640821;179640820;179640819 |
N2AB | 1924 | 5995;5996;5997 | chr2:178776094;178776093;178776092 | chr2:179640821;179640820;179640819 |
N2A | 1924 | 5995;5996;5997 | chr2:178776094;178776093;178776092 | chr2:179640821;179640820;179640819 |
N2B | 1878 | 5857;5858;5859 | chr2:178776094;178776093;178776092 | chr2:179640821;179640820;179640819 |
Novex-1 | 1878 | 5857;5858;5859 | chr2:178776094;178776093;178776092 | chr2:179640821;179640820;179640819 |
Novex-2 | 1878 | 5857;5858;5859 | chr2:178776094;178776093;178776092 | chr2:179640821;179640820;179640819 |
Novex-3 | 1924 | 5995;5996;5997 | chr2:178776094;178776093;178776092 | chr2:179640821;179640820;179640819 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1327562179 | 0.204 | 0.183 | N | 0.411 | 0.318 | 0.26169431596 | gnomAD-2.1.1 | 7.96E-06 | None | None | None | None | I | None | 0 | 5.78E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1327562179 | 0.204 | 0.183 | N | 0.411 | 0.318 | 0.26169431596 | gnomAD-4.0.0 | 3.42034E-06 | None | None | None | None | I | None | 0 | 4.47207E-05 | None | 0 | 0 | None | 0 | 0 | 8.993E-07 | 2.31863E-05 | 0 |
K/N | None | None | 0.351 | N | 0.425 | 0.127 | 0.218112801441 | gnomAD-4.0.0 | 1.5905E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85656E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3543 | ambiguous | 0.452 | ambiguous | -0.308 | Destabilizing | 0.061 | N | 0.311 | neutral | None | None | None | None | I |
K/C | 0.6473 | likely_pathogenic | 0.6901 | pathogenic | -0.29 | Destabilizing | 0.94 | D | 0.552 | neutral | None | None | None | None | I |
K/D | 0.7732 | likely_pathogenic | 0.8412 | pathogenic | -0.264 | Destabilizing | 0.418 | N | 0.537 | neutral | None | None | None | None | I |
K/E | 0.2971 | likely_benign | 0.3979 | ambiguous | -0.174 | Destabilizing | 0.183 | N | 0.411 | neutral | N | 0.482690385 | None | None | I |
K/F | 0.8719 | likely_pathogenic | 0.9023 | pathogenic | 0.049 | Stabilizing | 0.716 | D | 0.627 | neutral | None | None | None | None | I |
K/G | 0.6119 | likely_pathogenic | 0.7037 | pathogenic | -0.658 | Destabilizing | 0.228 | N | 0.474 | neutral | None | None | None | None | I |
K/H | 0.3257 | likely_benign | 0.3665 | ambiguous | -1.044 | Destabilizing | 0.836 | D | 0.567 | neutral | None | None | None | None | I |
K/I | 0.3854 | ambiguous | 0.4669 | ambiguous | 0.589 | Stabilizing | 0.001 | N | 0.357 | neutral | N | 0.503037484 | None | None | I |
K/L | 0.4464 | ambiguous | 0.5323 | ambiguous | 0.589 | Stabilizing | 0.061 | N | 0.375 | neutral | None | None | None | None | I |
K/M | 0.2774 | likely_benign | 0.351 | ambiguous | 0.336 | Stabilizing | 0.716 | D | 0.569 | neutral | None | None | None | None | I |
K/N | 0.5546 | ambiguous | 0.6417 | pathogenic | -0.345 | Destabilizing | 0.351 | N | 0.425 | neutral | N | 0.468624494 | None | None | I |
K/P | 0.8423 | likely_pathogenic | 0.8985 | pathogenic | 0.32 | Stabilizing | 0.593 | D | 0.595 | neutral | None | None | None | None | I |
K/Q | 0.1584 | likely_benign | 0.1882 | benign | -0.385 | Destabilizing | 0.351 | N | 0.497 | neutral | N | 0.495891639 | None | None | I |
K/R | 0.093 | likely_benign | 0.0956 | benign | -0.681 | Destabilizing | 0.002 | N | 0.151 | neutral | N | 0.493907906 | None | None | I |
K/S | 0.4491 | ambiguous | 0.5438 | ambiguous | -0.82 | Destabilizing | 0.129 | N | 0.355 | neutral | None | None | None | None | I |
K/T | 0.1262 | likely_benign | 0.1706 | benign | -0.547 | Destabilizing | 0.001 | N | 0.227 | neutral | N | 0.395664044 | None | None | I |
K/V | 0.3071 | likely_benign | 0.3727 | ambiguous | 0.32 | Stabilizing | 0.001 | N | 0.29 | neutral | None | None | None | None | I |
K/W | 0.8527 | likely_pathogenic | 0.881 | pathogenic | 0.087 | Stabilizing | 0.983 | D | 0.561 | neutral | None | None | None | None | I |
K/Y | 0.7763 | likely_pathogenic | 0.8169 | pathogenic | 0.345 | Stabilizing | 0.94 | D | 0.607 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.