Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19245 | 57958;57959;57960 | chr2:178595621;178595620;178595619 | chr2:179460348;179460347;179460346 |
N2AB | 17604 | 53035;53036;53037 | chr2:178595621;178595620;178595619 | chr2:179460348;179460347;179460346 |
N2A | 16677 | 50254;50255;50256 | chr2:178595621;178595620;178595619 | chr2:179460348;179460347;179460346 |
N2B | 10180 | 30763;30764;30765 | chr2:178595621;178595620;178595619 | chr2:179460348;179460347;179460346 |
Novex-1 | 10305 | 31138;31139;31140 | chr2:178595621;178595620;178595619 | chr2:179460348;179460347;179460346 |
Novex-2 | 10372 | 31339;31340;31341 | chr2:178595621;178595620;178595619 | chr2:179460348;179460347;179460346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs763810038 | -0.267 | 0.603 | N | 0.543 | 0.215 | 0.551838628669 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.579 | likely_pathogenic | 0.6371 | pathogenic | -1.821 | Destabilizing | 0.645 | D | 0.668 | neutral | D | 0.522354187 | None | None | N |
V/C | 0.8918 | likely_pathogenic | 0.8981 | pathogenic | -1.568 | Destabilizing | 0.995 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/D | 0.9937 | likely_pathogenic | 0.9949 | pathogenic | -1.448 | Destabilizing | 0.006 | N | 0.694 | prob.neutral | N | 0.497749288 | None | None | N |
V/E | 0.9778 | likely_pathogenic | 0.9814 | pathogenic | -1.325 | Destabilizing | 0.547 | D | 0.768 | deleterious | None | None | None | None | N |
V/F | 0.6051 | likely_pathogenic | 0.6298 | pathogenic | -1.165 | Destabilizing | 0.975 | D | 0.733 | prob.delet. | N | 0.489934474 | None | None | N |
V/G | 0.8917 | likely_pathogenic | 0.9054 | pathogenic | -2.276 | Highly Destabilizing | 0.864 | D | 0.805 | deleterious | D | 0.523197377 | None | None | N |
V/H | 0.9899 | likely_pathogenic | 0.9909 | pathogenic | -1.715 | Destabilizing | 0.985 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.0888 | likely_benign | 0.089 | benign | -0.612 | Destabilizing | 0.603 | D | 0.543 | neutral | N | 0.507035231 | None | None | N |
V/K | 0.9872 | likely_pathogenic | 0.9884 | pathogenic | -1.502 | Destabilizing | 0.894 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.48 | ambiguous | 0.4889 | ambiguous | -0.612 | Destabilizing | 0.603 | D | 0.661 | neutral | N | 0.518113442 | None | None | N |
V/M | 0.496 | ambiguous | 0.5513 | ambiguous | -0.685 | Destabilizing | 0.981 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/N | 0.9801 | likely_pathogenic | 0.9826 | pathogenic | -1.552 | Destabilizing | 0.809 | D | 0.851 | deleterious | None | None | None | None | N |
V/P | 0.975 | likely_pathogenic | 0.9774 | pathogenic | -0.982 | Destabilizing | 0.945 | D | 0.82 | deleterious | None | None | None | None | N |
V/Q | 0.9741 | likely_pathogenic | 0.9769 | pathogenic | -1.514 | Destabilizing | 0.894 | D | 0.821 | deleterious | None | None | None | None | N |
V/R | 0.9769 | likely_pathogenic | 0.979 | pathogenic | -1.183 | Destabilizing | 0.894 | D | 0.854 | deleterious | None | None | None | None | N |
V/S | 0.8975 | likely_pathogenic | 0.9127 | pathogenic | -2.256 | Highly Destabilizing | 0.809 | D | 0.798 | deleterious | None | None | None | None | N |
V/T | 0.7939 | likely_pathogenic | 0.8107 | pathogenic | -1.977 | Destabilizing | 0.707 | D | 0.65 | neutral | None | None | None | None | N |
V/W | 0.9915 | likely_pathogenic | 0.9922 | pathogenic | -1.4 | Destabilizing | 0.995 | D | 0.802 | deleterious | None | None | None | None | N |
V/Y | 0.9595 | likely_pathogenic | 0.9657 | pathogenic | -1.085 | Destabilizing | 0.981 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.