Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1925 | 5998;5999;6000 | chr2:178776091;178776090;178776089 | chr2:179640818;179640817;179640816 |
N2AB | 1925 | 5998;5999;6000 | chr2:178776091;178776090;178776089 | chr2:179640818;179640817;179640816 |
N2A | 1925 | 5998;5999;6000 | chr2:178776091;178776090;178776089 | chr2:179640818;179640817;179640816 |
N2B | 1879 | 5860;5861;5862 | chr2:178776091;178776090;178776089 | chr2:179640818;179640817;179640816 |
Novex-1 | 1879 | 5860;5861;5862 | chr2:178776091;178776090;178776089 | chr2:179640818;179640817;179640816 |
Novex-2 | 1879 | 5860;5861;5862 | chr2:178776091;178776090;178776089 | chr2:179640818;179640817;179640816 |
Novex-3 | 1925 | 5998;5999;6000 | chr2:178776091;178776090;178776089 | chr2:179640818;179640817;179640816 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.635 | 0.461 | 0.536521311054 | gnomAD-4.0.0 | 3.18102E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71314E-06 | 0 | 0 |
V/M | None | None | 1.0 | D | 0.759 | 0.503 | 0.616271755186 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5769 | likely_pathogenic | 0.6078 | pathogenic | -2.16 | Highly Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.46457887 | None | None | N |
V/C | 0.8808 | likely_pathogenic | 0.8749 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/D | 0.981 | likely_pathogenic | 0.9846 | pathogenic | -2.909 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/E | 0.9434 | likely_pathogenic | 0.9489 | pathogenic | -2.736 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.636232009 | None | None | N |
V/F | 0.8124 | likely_pathogenic | 0.7822 | pathogenic | -1.362 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/G | 0.7025 | likely_pathogenic | 0.7475 | pathogenic | -2.635 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | N | 0.501614064 | None | None | N |
V/H | 0.9884 | likely_pathogenic | 0.9884 | pathogenic | -2.423 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
V/I | 0.1774 | likely_benign | 0.162 | benign | -0.844 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
V/K | 0.9742 | likely_pathogenic | 0.9765 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/L | 0.7431 | likely_pathogenic | 0.7491 | pathogenic | -0.844 | Destabilizing | 0.997 | D | 0.641 | neutral | D | 0.549973804 | None | None | N |
V/M | 0.6373 | likely_pathogenic | 0.6317 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.569178212 | None | None | N |
V/N | 0.9401 | likely_pathogenic | 0.943 | pathogenic | -2.147 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
V/P | 0.9955 | likely_pathogenic | 0.9966 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/Q | 0.9457 | likely_pathogenic | 0.9465 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/R | 0.9651 | likely_pathogenic | 0.9675 | pathogenic | -1.662 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
V/S | 0.7875 | likely_pathogenic | 0.8014 | pathogenic | -2.659 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
V/T | 0.5529 | ambiguous | 0.5658 | pathogenic | -2.372 | Highly Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
V/W | 0.9964 | likely_pathogenic | 0.9959 | pathogenic | -1.916 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/Y | 0.9782 | likely_pathogenic | 0.9747 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.