Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19261 | 58006;58007;58008 | chr2:178595573;178595572;178595571 | chr2:179460300;179460299;179460298 |
N2AB | 17620 | 53083;53084;53085 | chr2:178595573;178595572;178595571 | chr2:179460300;179460299;179460298 |
N2A | 16693 | 50302;50303;50304 | chr2:178595573;178595572;178595571 | chr2:179460300;179460299;179460298 |
N2B | 10196 | 30811;30812;30813 | chr2:178595573;178595572;178595571 | chr2:179460300;179460299;179460298 |
Novex-1 | 10321 | 31186;31187;31188 | chr2:178595573;178595572;178595571 | chr2:179460300;179460299;179460298 |
Novex-2 | 10388 | 31387;31388;31389 | chr2:178595573;178595572;178595571 | chr2:179460300;179460299;179460298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1454108057 | None | 0.999 | N | 0.612 | 0.472 | 0.358744678677 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/D | None | None | 0.999 | N | 0.465 | 0.293 | 0.331365685468 | gnomAD-4.0.0 | 1.40367E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.83211E-06 | 0 | 0 |
E/K | rs200311184 | -0.531 | 0.999 | N | 0.475 | 0.395 | None | gnomAD-2.1.1 | 5.11E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.21E-05 | 0 |
E/K | rs200311184 | -0.531 | 0.999 | N | 0.475 | 0.395 | None | gnomAD-4.0.0 | 1.68943E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.03174E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6207 | likely_pathogenic | 0.6833 | pathogenic | -0.484 | Destabilizing | 0.999 | D | 0.612 | neutral | N | 0.510032677 | None | None | I |
E/C | 0.9388 | likely_pathogenic | 0.9529 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
E/D | 0.9326 | likely_pathogenic | 0.944 | pathogenic | -1.347 | Destabilizing | 0.999 | D | 0.465 | neutral | N | 0.495891821 | None | None | I |
E/F | 0.9835 | likely_pathogenic | 0.9887 | pathogenic | -1.037 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
E/G | 0.8087 | likely_pathogenic | 0.8359 | pathogenic | -0.777 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.491118881 | None | None | I |
E/H | 0.9449 | likely_pathogenic | 0.9586 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
E/I | 0.7473 | likely_pathogenic | 0.8216 | pathogenic | 0.287 | Stabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
E/K | 0.6449 | likely_pathogenic | 0.7236 | pathogenic | -0.699 | Destabilizing | 0.999 | D | 0.475 | neutral | N | 0.465417302 | None | None | I |
E/L | 0.9283 | likely_pathogenic | 0.9477 | pathogenic | 0.287 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
E/M | 0.8422 | likely_pathogenic | 0.8881 | pathogenic | 0.678 | Stabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
E/N | 0.9425 | likely_pathogenic | 0.9561 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/P | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
E/Q | 0.3322 | likely_benign | 0.3882 | ambiguous | -0.744 | Destabilizing | 1.0 | D | 0.596 | neutral | N | 0.469923526 | None | None | I |
E/R | 0.7606 | likely_pathogenic | 0.8103 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/S | 0.7626 | likely_pathogenic | 0.8162 | pathogenic | -1.302 | Destabilizing | 0.999 | D | 0.53 | neutral | None | None | None | None | I |
E/T | 0.7727 | likely_pathogenic | 0.8262 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
E/V | 0.4677 | ambiguous | 0.5631 | ambiguous | 0.052 | Stabilizing | 1.0 | D | 0.785 | deleterious | N | 0.441839241 | None | None | I |
E/W | 0.9953 | likely_pathogenic | 0.9965 | pathogenic | -1.348 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
E/Y | 0.9782 | likely_pathogenic | 0.9854 | pathogenic | -0.897 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.