Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19265 | 58018;58019;58020 | chr2:178595561;178595560;178595559 | chr2:179460288;179460287;179460286 |
N2AB | 17624 | 53095;53096;53097 | chr2:178595561;178595560;178595559 | chr2:179460288;179460287;179460286 |
N2A | 16697 | 50314;50315;50316 | chr2:178595561;178595560;178595559 | chr2:179460288;179460287;179460286 |
N2B | 10200 | 30823;30824;30825 | chr2:178595561;178595560;178595559 | chr2:179460288;179460287;179460286 |
Novex-1 | 10325 | 31198;31199;31200 | chr2:178595561;178595560;178595559 | chr2:179460288;179460287;179460286 |
Novex-2 | 10392 | 31399;31400;31401 | chr2:178595561;178595560;178595559 | chr2:179460288;179460287;179460286 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1361416773 | -0.322 | 1.0 | D | 0.887 | 0.713 | 0.920238496592 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.88018E-04 | 0 | 0 |
G/V | rs1361416773 | -0.322 | 1.0 | D | 0.887 | 0.713 | 0.920238496592 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 9.46E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9327 | likely_pathogenic | 0.9605 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.554808575 | None | None | I |
G/C | 0.9743 | likely_pathogenic | 0.986 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.556076022 | None | None | I |
G/D | 0.9881 | likely_pathogenic | 0.9941 | pathogenic | -1.246 | Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.536197341 | None | None | I |
G/E | 0.9945 | likely_pathogenic | 0.9971 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | I |
G/F | 0.9962 | likely_pathogenic | 0.9978 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
G/H | 0.9956 | likely_pathogenic | 0.9976 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/I | 0.9967 | likely_pathogenic | 0.9978 | pathogenic | -0.703 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
G/K | 0.9953 | likely_pathogenic | 0.9974 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | I |
G/L | 0.9949 | likely_pathogenic | 0.997 | pathogenic | -0.703 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/M | 0.9974 | likely_pathogenic | 0.9986 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
G/N | 0.9919 | likely_pathogenic | 0.9953 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/P | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | I |
G/Q | 0.9916 | likely_pathogenic | 0.9956 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | I |
G/R | 0.9837 | likely_pathogenic | 0.9911 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.919 | deleterious | D | 0.555062064 | None | None | I |
G/S | 0.8923 | likely_pathogenic | 0.941 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.536197341 | None | None | I |
G/T | 0.9841 | likely_pathogenic | 0.9898 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | I |
G/V | 0.9935 | likely_pathogenic | 0.9956 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.555315554 | None | None | I |
G/W | 0.9931 | likely_pathogenic | 0.9963 | pathogenic | -1.469 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/Y | 0.9955 | likely_pathogenic | 0.9975 | pathogenic | -1.152 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.