Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19268 | 58027;58028;58029 | chr2:178595552;178595551;178595550 | chr2:179460279;179460278;179460277 |
N2AB | 17627 | 53104;53105;53106 | chr2:178595552;178595551;178595550 | chr2:179460279;179460278;179460277 |
N2A | 16700 | 50323;50324;50325 | chr2:178595552;178595551;178595550 | chr2:179460279;179460278;179460277 |
N2B | 10203 | 30832;30833;30834 | chr2:178595552;178595551;178595550 | chr2:179460279;179460278;179460277 |
Novex-1 | 10328 | 31207;31208;31209 | chr2:178595552;178595551;178595550 | chr2:179460279;179460278;179460277 |
Novex-2 | 10395 | 31408;31409;31410 | chr2:178595552;178595551;178595550 | chr2:179460279;179460278;179460277 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | None | None | 1.0 | N | 0.829 | 0.439 | 0.524998368707 | gnomAD-4.0.0 | 1.71411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.07324E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1604 | likely_benign | 0.1565 | benign | -1.047 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.510824898 | None | None | N |
P/C | 0.5949 | likely_pathogenic | 0.6507 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
P/D | 0.5708 | likely_pathogenic | 0.5766 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/E | 0.4015 | ambiguous | 0.4197 | ambiguous | -0.707 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
P/F | 0.7123 | likely_pathogenic | 0.7657 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/G | 0.5428 | ambiguous | 0.5322 | ambiguous | -1.298 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
P/H | 0.3386 | likely_benign | 0.3682 | ambiguous | -0.778 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/I | 0.4296 | ambiguous | 0.4784 | ambiguous | -0.488 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/K | 0.4196 | ambiguous | 0.4633 | ambiguous | -0.787 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/L | 0.2222 | likely_benign | 0.2419 | benign | -0.488 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.520657889 | None | None | N |
P/M | 0.4917 | ambiguous | 0.5176 | ambiguous | -0.404 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
P/N | 0.4644 | ambiguous | 0.4686 | ambiguous | -0.471 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/Q | 0.2687 | likely_benign | 0.2764 | benign | -0.675 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.50776595 | None | None | N |
P/R | 0.2729 | likely_benign | 0.3099 | benign | -0.262 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.472017576 | None | None | N |
P/S | 0.2512 | likely_benign | 0.2467 | benign | -0.931 | Destabilizing | 1.0 | D | 0.8 | deleterious | N | 0.478449584 | None | None | N |
P/T | 0.2164 | likely_benign | 0.2196 | benign | -0.869 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.478449584 | None | None | N |
P/V | 0.2942 | likely_benign | 0.3214 | benign | -0.639 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/W | 0.8327 | likely_pathogenic | 0.8712 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
P/Y | 0.649 | likely_pathogenic | 0.7121 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.