Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1927 | 6004;6005;6006 | chr2:178776085;178776084;178776083 | chr2:179640812;179640811;179640810 |
N2AB | 1927 | 6004;6005;6006 | chr2:178776085;178776084;178776083 | chr2:179640812;179640811;179640810 |
N2A | 1927 | 6004;6005;6006 | chr2:178776085;178776084;178776083 | chr2:179640812;179640811;179640810 |
N2B | 1881 | 5866;5867;5868 | chr2:178776085;178776084;178776083 | chr2:179640812;179640811;179640810 |
Novex-1 | 1881 | 5866;5867;5868 | chr2:178776085;178776084;178776083 | chr2:179640812;179640811;179640810 |
Novex-2 | 1881 | 5866;5867;5868 | chr2:178776085;178776084;178776083 | chr2:179640812;179640811;179640810 |
Novex-3 | 1927 | 6004;6005;6006 | chr2:178776085;178776084;178776083 | chr2:179640812;179640811;179640810 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | D | 0.895 | 0.761 | 0.774520175461 | gnomAD-4.0.0 | 1.59049E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77239E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9661 | likely_pathogenic | 0.9689 | pathogenic | -3.061 | Highly Destabilizing | 0.983 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/C | 0.9467 | likely_pathogenic | 0.9417 | pathogenic | -2.325 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.419 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/E | 0.9979 | likely_pathogenic | 0.9983 | pathogenic | -3.14 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
L/F | 0.7045 | likely_pathogenic | 0.66 | pathogenic | -1.808 | Destabilizing | 0.993 | D | 0.83 | deleterious | D | 0.730378999 | None | None | N |
L/G | 0.9949 | likely_pathogenic | 0.9956 | pathogenic | -3.661 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/H | 0.9964 | likely_pathogenic | 0.9966 | pathogenic | -3.004 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.733724328 | None | None | N |
L/I | 0.3118 | likely_benign | 0.2893 | benign | -1.282 | Destabilizing | 0.117 | N | 0.311 | neutral | N | 0.520155807 | None | None | N |
L/K | 0.9964 | likely_pathogenic | 0.997 | pathogenic | -2.423 | Highly Destabilizing | 0.998 | D | 0.886 | deleterious | None | None | None | None | N |
L/M | 0.3436 | ambiguous | 0.348 | ambiguous | -1.293 | Destabilizing | 0.995 | D | 0.8 | deleterious | None | None | None | None | N |
L/N | 0.9983 | likely_pathogenic | 0.9983 | pathogenic | -2.922 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/P | 0.9986 | likely_pathogenic | 0.9989 | pathogenic | -1.861 | Destabilizing | 0.999 | D | 0.895 | deleterious | D | 0.733724328 | None | None | N |
L/Q | 0.9941 | likely_pathogenic | 0.9955 | pathogenic | -2.706 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/R | 0.9931 | likely_pathogenic | 0.9946 | pathogenic | -2.147 | Highly Destabilizing | 0.999 | D | 0.884 | deleterious | D | 0.733724328 | None | None | N |
L/S | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -3.648 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
L/T | 0.9727 | likely_pathogenic | 0.9762 | pathogenic | -3.213 | Highly Destabilizing | 0.995 | D | 0.845 | deleterious | None | None | None | None | N |
L/V | 0.3932 | ambiguous | 0.3727 | ambiguous | -1.861 | Destabilizing | 0.898 | D | 0.67 | neutral | N | 0.498508951 | None | None | N |
L/W | 0.9778 | likely_pathogenic | 0.9791 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/Y | 0.9813 | likely_pathogenic | 0.9781 | pathogenic | -1.97 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.