Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19278 | 58057;58058;58059 | chr2:178595522;178595521;178595520 | chr2:179460249;179460248;179460247 |
N2AB | 17637 | 53134;53135;53136 | chr2:178595522;178595521;178595520 | chr2:179460249;179460248;179460247 |
N2A | 16710 | 50353;50354;50355 | chr2:178595522;178595521;178595520 | chr2:179460249;179460248;179460247 |
N2B | 10213 | 30862;30863;30864 | chr2:178595522;178595521;178595520 | chr2:179460249;179460248;179460247 |
Novex-1 | 10338 | 31237;31238;31239 | chr2:178595522;178595521;178595520 | chr2:179460249;179460248;179460247 |
Novex-2 | 10405 | 31438;31439;31440 | chr2:178595522;178595521;178595520 | chr2:179460249;179460248;179460247 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs56025724 | -2.308 | 0.985 | N | 0.398 | 0.182 | 0.602907052046 | gnomAD-2.1.1 | 4.75E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.71366E-04 | None | 0 | None | 0 | 0 | 0 |
I/V | rs56025724 | -2.308 | 0.985 | N | 0.398 | 0.182 | 0.602907052046 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9425E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs56025724 | -2.308 | 0.985 | N | 0.398 | 0.182 | 0.602907052046 | gnomAD-4.0.0 | 7.70423E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.63878E-04 | None | 0 | 0 | 8.69667E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.74 | likely_pathogenic | 0.7584 | pathogenic | -2.978 | Highly Destabilizing | 0.998 | D | 0.689 | prob.delet. | None | None | None | None | N |
I/C | 0.8803 | likely_pathogenic | 0.8853 | pathogenic | -2.528 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
I/D | 0.9908 | likely_pathogenic | 0.9946 | pathogenic | -3.496 | Highly Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
I/E | 0.9829 | likely_pathogenic | 0.9885 | pathogenic | -3.293 | Highly Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
I/F | 0.4722 | ambiguous | 0.5535 | ambiguous | -1.71 | Destabilizing | 0.999 | D | 0.749 | deleterious | D | 0.523202336 | None | None | N |
I/G | 0.9636 | likely_pathogenic | 0.9739 | pathogenic | -3.476 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
I/H | 0.9739 | likely_pathogenic | 0.9839 | pathogenic | -2.662 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
I/K | 0.968 | likely_pathogenic | 0.9807 | pathogenic | -2.3 | Highly Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
I/L | 0.2697 | likely_benign | 0.2932 | benign | -1.526 | Destabilizing | 0.985 | D | 0.422 | neutral | N | 0.491319204 | None | None | N |
I/M | 0.221 | likely_benign | 0.2331 | benign | -1.705 | Destabilizing | 0.999 | D | 0.732 | deleterious | N | 0.486628247 | None | None | N |
I/N | 0.8739 | likely_pathogenic | 0.912 | pathogenic | -2.657 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.524935919 | None | None | N |
I/P | 0.8799 | likely_pathogenic | 0.9126 | pathogenic | -1.995 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
I/Q | 0.9543 | likely_pathogenic | 0.9687 | pathogenic | -2.578 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
I/R | 0.9453 | likely_pathogenic | 0.9669 | pathogenic | -1.864 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
I/S | 0.8149 | likely_pathogenic | 0.8532 | pathogenic | -3.318 | Highly Destabilizing | 0.999 | D | 0.812 | deleterious | D | 0.524415844 | None | None | N |
I/T | 0.8005 | likely_pathogenic | 0.8275 | pathogenic | -2.983 | Highly Destabilizing | 0.999 | D | 0.822 | deleterious | N | 0.503827141 | None | None | N |
I/V | 0.1587 | likely_benign | 0.1535 | benign | -1.995 | Destabilizing | 0.985 | D | 0.398 | neutral | N | 0.46963721 | None | None | N |
I/W | 0.976 | likely_pathogenic | 0.9846 | pathogenic | -2.014 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
I/Y | 0.9353 | likely_pathogenic | 0.957 | pathogenic | -1.865 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.