Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19279 | 58060;58061;58062 | chr2:178595519;178595518;178595517 | chr2:179460246;179460245;179460244 |
N2AB | 17638 | 53137;53138;53139 | chr2:178595519;178595518;178595517 | chr2:179460246;179460245;179460244 |
N2A | 16711 | 50356;50357;50358 | chr2:178595519;178595518;178595517 | chr2:179460246;179460245;179460244 |
N2B | 10214 | 30865;30866;30867 | chr2:178595519;178595518;178595517 | chr2:179460246;179460245;179460244 |
Novex-1 | 10339 | 31240;31241;31242 | chr2:178595519;178595518;178595517 | chr2:179460246;179460245;179460244 |
Novex-2 | 10406 | 31441;31442;31443 | chr2:178595519;178595518;178595517 | chr2:179460246;179460245;179460244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.651 | N | 0.425 | 0.198 | 0.517432700143 | gnomAD-4.0.0 | 1.75052E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.13042E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4112 | ambiguous | 0.5694 | pathogenic | 0.017 | Stabilizing | 0.505 | D | 0.342 | neutral | None | None | None | None | N |
R/C | 0.1966 | likely_benign | 0.2749 | benign | -0.136 | Destabilizing | 0.995 | D | 0.348 | neutral | None | None | None | None | N |
R/D | 0.6926 | likely_pathogenic | 0.8034 | pathogenic | 0.07 | Stabilizing | 0.712 | D | 0.373 | neutral | None | None | None | None | N |
R/E | 0.314 | likely_benign | 0.4424 | ambiguous | 0.178 | Stabilizing | 0.338 | N | 0.333 | neutral | None | None | None | None | N |
R/F | 0.6897 | likely_pathogenic | 0.8102 | pathogenic | 0.031 | Stabilizing | 0.946 | D | 0.43 | neutral | None | None | None | None | N |
R/G | 0.3069 | likely_benign | 0.445 | ambiguous | -0.243 | Destabilizing | 0.651 | D | 0.425 | neutral | N | 0.509659823 | None | None | N |
R/H | 0.123 | likely_benign | 0.1578 | benign | -0.733 | Destabilizing | 0.018 | N | 0.191 | neutral | None | None | None | None | N |
R/I | 0.3686 | ambiguous | 0.489 | ambiguous | 0.683 | Stabilizing | 0.93 | D | 0.465 | neutral | D | 0.52662943 | None | None | N |
R/K | 0.0924 | likely_benign | 0.112 | benign | 0.002 | Stabilizing | 0.01 | N | 0.155 | neutral | N | 0.415842797 | None | None | N |
R/L | 0.3213 | likely_benign | 0.4436 | ambiguous | 0.683 | Stabilizing | 0.712 | D | 0.417 | neutral | None | None | None | None | N |
R/M | 0.3156 | likely_benign | 0.4598 | ambiguous | 0.065 | Stabilizing | 0.982 | D | 0.39 | neutral | None | None | None | None | N |
R/N | 0.5938 | likely_pathogenic | 0.7076 | pathogenic | 0.203 | Stabilizing | 0.712 | D | 0.315 | neutral | None | None | None | None | N |
R/P | 0.8822 | likely_pathogenic | 0.8925 | pathogenic | 0.483 | Stabilizing | 0.946 | D | 0.443 | neutral | None | None | None | None | N |
R/Q | 0.0934 | likely_benign | 0.1203 | benign | 0.169 | Stabilizing | 0.032 | N | 0.224 | neutral | None | None | None | None | N |
R/S | 0.4297 | ambiguous | 0.586 | pathogenic | -0.199 | Destabilizing | 0.651 | D | 0.397 | neutral | N | 0.503424497 | None | None | N |
R/T | 0.1921 | likely_benign | 0.3084 | benign | 0.073 | Stabilizing | 0.651 | D | 0.378 | neutral | N | 0.495439732 | None | None | N |
R/V | 0.3867 | ambiguous | 0.5136 | ambiguous | 0.483 | Stabilizing | 0.834 | D | 0.438 | neutral | None | None | None | None | N |
R/W | 0.2542 | likely_benign | 0.3842 | ambiguous | 0.061 | Stabilizing | 0.995 | D | 0.395 | neutral | None | None | None | None | N |
R/Y | 0.5186 | ambiguous | 0.6554 | pathogenic | 0.442 | Stabilizing | 0.897 | D | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.