Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19280 | 58063;58064;58065 | chr2:178595516;178595515;178595514 | chr2:179460243;179460242;179460241 |
N2AB | 17639 | 53140;53141;53142 | chr2:178595516;178595515;178595514 | chr2:179460243;179460242;179460241 |
N2A | 16712 | 50359;50360;50361 | chr2:178595516;178595515;178595514 | chr2:179460243;179460242;179460241 |
N2B | 10215 | 30868;30869;30870 | chr2:178595516;178595515;178595514 | chr2:179460243;179460242;179460241 |
Novex-1 | 10340 | 31243;31244;31245 | chr2:178595516;178595515;178595514 | chr2:179460243;179460242;179460241 |
Novex-2 | 10407 | 31444;31445;31446 | chr2:178595516;178595515;178595514 | chr2:179460243;179460242;179460241 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs566966765 | 0.762 | 0.058 | N | 0.647 | 0.184 | 0.252681307341 | gnomAD-2.1.1 | 6.25E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.58E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3417 | ambiguous | 0.3175 | benign | -0.187 | Destabilizing | 0.058 | N | 0.607 | neutral | N | 0.469850641 | None | None | N |
E/C | 0.8987 | likely_pathogenic | 0.8857 | pathogenic | 0.016 | Stabilizing | 0.869 | D | 0.548 | neutral | None | None | None | None | N |
E/D | 0.0489 | likely_benign | 0.0625 | benign | -0.206 | Destabilizing | None | N | 0.094 | neutral | N | 0.381748867 | None | None | N |
E/F | 0.8812 | likely_pathogenic | 0.8824 | pathogenic | -0.18 | Destabilizing | 0.637 | D | 0.529 | neutral | None | None | None | None | N |
E/G | 0.374 | ambiguous | 0.364 | ambiguous | -0.353 | Destabilizing | 0.058 | N | 0.567 | neutral | N | 0.489476551 | None | None | N |
E/H | 0.6708 | likely_pathogenic | 0.6749 | pathogenic | 0.147 | Stabilizing | 0.366 | N | 0.483 | neutral | None | None | None | None | N |
E/I | 0.7108 | likely_pathogenic | 0.7005 | pathogenic | 0.201 | Stabilizing | 0.366 | N | 0.607 | neutral | None | None | None | None | N |
E/K | 0.5124 | ambiguous | 0.507 | ambiguous | 0.411 | Stabilizing | 0.058 | N | 0.647 | neutral | N | 0.504963292 | None | None | N |
E/L | 0.6518 | likely_pathogenic | 0.652 | pathogenic | 0.201 | Stabilizing | 0.221 | N | 0.613 | neutral | None | None | None | None | N |
E/M | 0.7563 | likely_pathogenic | 0.7362 | pathogenic | 0.187 | Stabilizing | 0.869 | D | 0.541 | neutral | None | None | None | None | N |
E/N | 0.2249 | likely_benign | 0.2394 | benign | 0.219 | Stabilizing | 0.039 | N | 0.593 | neutral | None | None | None | None | N |
E/P | 0.6046 | likely_pathogenic | 0.6284 | pathogenic | 0.092 | Stabilizing | 0.141 | N | 0.673 | prob.neutral | None | None | None | None | N |
E/Q | 0.3526 | ambiguous | 0.323 | benign | 0.234 | Stabilizing | 0.058 | N | 0.61 | neutral | N | 0.495362374 | None | None | N |
E/R | 0.6603 | likely_pathogenic | 0.6578 | pathogenic | 0.597 | Stabilizing | 0.221 | N | 0.508 | neutral | None | None | None | None | N |
E/S | 0.3108 | likely_benign | 0.2925 | benign | 0.038 | Stabilizing | 0.016 | N | 0.578 | neutral | None | None | None | None | N |
E/T | 0.4674 | ambiguous | 0.447 | ambiguous | 0.171 | Stabilizing | 0.075 | N | 0.619 | neutral | None | None | None | None | N |
E/V | 0.5141 | ambiguous | 0.4884 | ambiguous | 0.092 | Stabilizing | 0.303 | N | 0.621 | neutral | N | 0.506350159 | None | None | N |
E/W | 0.9526 | likely_pathogenic | 0.9542 | pathogenic | -0.089 | Destabilizing | 0.869 | D | 0.607 | neutral | None | None | None | None | N |
E/Y | 0.7181 | likely_pathogenic | 0.7361 | pathogenic | 0.055 | Stabilizing | 0.637 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.