Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19286 | 58081;58082;58083 | chr2:178594638;178594637;178594636 | chr2:179459365;179459364;179459363 |
N2AB | 17645 | 53158;53159;53160 | chr2:178594638;178594637;178594636 | chr2:179459365;179459364;179459363 |
N2A | 16718 | 50377;50378;50379 | chr2:178594638;178594637;178594636 | chr2:179459365;179459364;179459363 |
N2B | 10221 | 30886;30887;30888 | chr2:178594638;178594637;178594636 | chr2:179459365;179459364;179459363 |
Novex-1 | 10346 | 31261;31262;31263 | chr2:178594638;178594637;178594636 | chr2:179459365;179459364;179459363 |
Novex-2 | 10413 | 31462;31463;31464 | chr2:178594638;178594637;178594636 | chr2:179459365;179459364;179459363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs558844442 | -1.478 | 0.939 | N | 0.523 | 0.267 | 0.389439708392 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93723E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs558844442 | -1.478 | 0.939 | N | 0.523 | 0.267 | 0.389439708392 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/K | rs558844442 | -1.478 | 0.939 | N | 0.523 | 0.267 | 0.389439708392 | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs558844442 | -1.521 | 0.991 | N | 0.569 | 0.24 | 0.313210971179 | gnomAD-2.1.1 | 4.24E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.25E-06 | 0 |
E/Q | rs558844442 | -1.521 | 0.991 | N | 0.569 | 0.24 | 0.313210971179 | gnomAD-4.0.0 | 2.76979E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81238E-06 | 1.1976E-05 | 1.67977E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5008 | ambiguous | 0.4927 | ambiguous | -0.856 | Destabilizing | 0.939 | D | 0.495 | neutral | N | 0.475167955 | None | None | N |
E/C | 0.9644 | likely_pathogenic | 0.9662 | pathogenic | -0.562 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
E/D | 0.1725 | likely_benign | 0.1727 | benign | -1.177 | Destabilizing | 0.046 | N | 0.318 | neutral | N | 0.380254852 | None | None | N |
E/F | 0.9704 | likely_pathogenic | 0.9735 | pathogenic | -0.122 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
E/G | 0.3357 | likely_benign | 0.3445 | ambiguous | -1.281 | Destabilizing | 0.046 | N | 0.419 | neutral | N | 0.343120616 | None | None | N |
E/H | 0.8987 | likely_pathogenic | 0.9084 | pathogenic | -0.519 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
E/I | 0.9286 | likely_pathogenic | 0.9334 | pathogenic | 0.329 | Stabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | N |
E/K | 0.7077 | likely_pathogenic | 0.7389 | pathogenic | -0.982 | Destabilizing | 0.939 | D | 0.523 | neutral | N | 0.474994597 | None | None | N |
E/L | 0.8453 | likely_pathogenic | 0.8513 | pathogenic | 0.329 | Stabilizing | 0.993 | D | 0.78 | deleterious | None | None | None | None | N |
E/M | 0.8743 | likely_pathogenic | 0.8927 | pathogenic | 0.819 | Stabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/N | 0.6289 | likely_pathogenic | 0.6334 | pathogenic | -1.402 | Destabilizing | 0.973 | D | 0.571 | neutral | None | None | None | None | N |
E/P | 0.9744 | likely_pathogenic | 0.9799 | pathogenic | -0.046 | Destabilizing | 0.993 | D | 0.657 | neutral | None | None | None | None | N |
E/Q | 0.4394 | ambiguous | 0.4712 | ambiguous | -1.188 | Destabilizing | 0.991 | D | 0.569 | neutral | N | 0.499506252 | None | None | N |
E/R | 0.8224 | likely_pathogenic | 0.8352 | pathogenic | -0.734 | Destabilizing | 0.993 | D | 0.573 | neutral | None | None | None | None | N |
E/S | 0.4982 | ambiguous | 0.4952 | ambiguous | -1.851 | Destabilizing | 0.953 | D | 0.479 | neutral | None | None | None | None | N |
E/T | 0.709 | likely_pathogenic | 0.724 | pathogenic | -1.491 | Destabilizing | 0.993 | D | 0.608 | neutral | None | None | None | None | N |
E/V | 0.8077 | likely_pathogenic | 0.8148 | pathogenic | -0.046 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | N | 0.519401522 | None | None | N |
E/W | 0.987 | likely_pathogenic | 0.9888 | pathogenic | 0.069 | Stabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/Y | 0.9392 | likely_pathogenic | 0.9445 | pathogenic | 0.112 | Stabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.