Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19289 | 58090;58091;58092 | chr2:178594629;178594628;178594627 | chr2:179459356;179459355;179459354 |
N2AB | 17648 | 53167;53168;53169 | chr2:178594629;178594628;178594627 | chr2:179459356;179459355;179459354 |
N2A | 16721 | 50386;50387;50388 | chr2:178594629;178594628;178594627 | chr2:179459356;179459355;179459354 |
N2B | 10224 | 30895;30896;30897 | chr2:178594629;178594628;178594627 | chr2:179459356;179459355;179459354 |
Novex-1 | 10349 | 31270;31271;31272 | chr2:178594629;178594628;178594627 | chr2:179459356;179459355;179459354 |
Novex-2 | 10416 | 31471;31472;31473 | chr2:178594629;178594628;178594627 | chr2:179459356;179459355;179459354 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.682 | 0.363 | 0.59128977468 | gnomAD-4.0.0 | 1.6007E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87581E-06 | 0 | 0 |
E/K | rs1031046164 | None | 0.999 | D | 0.573 | 0.385 | 0.573099714865 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1031046164 | None | 0.999 | D | 0.573 | 0.385 | 0.573099714865 | gnomAD-4.0.0 | 6.57652E-06 | None | None | None | None | N | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3952 | ambiguous | 0.3688 | ambiguous | -0.776 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.502493416 | None | None | N |
E/C | 0.9411 | likely_pathogenic | 0.9296 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/D | 0.5119 | ambiguous | 0.4838 | ambiguous | -1.124 | Destabilizing | 0.999 | D | 0.471 | neutral | N | 0.504090926 | None | None | N |
E/F | 0.9447 | likely_pathogenic | 0.9347 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
E/G | 0.4695 | ambiguous | 0.4232 | ambiguous | -1.117 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.463647026 | None | None | N |
E/H | 0.8838 | likely_pathogenic | 0.8673 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
E/I | 0.5686 | likely_pathogenic | 0.5759 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/K | 0.4668 | ambiguous | 0.4391 | ambiguous | -0.973 | Destabilizing | 0.999 | D | 0.573 | neutral | D | 0.524060767 | None | None | N |
E/L | 0.6974 | likely_pathogenic | 0.7028 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/M | 0.6812 | likely_pathogenic | 0.6818 | pathogenic | 0.559 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/N | 0.6948 | likely_pathogenic | 0.6747 | pathogenic | -1.221 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/P | 0.9799 | likely_pathogenic | 0.9785 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Q | 0.3135 | likely_benign | 0.3067 | benign | -1.082 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.477749687 | None | None | N |
E/R | 0.6201 | likely_pathogenic | 0.5813 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/S | 0.5089 | ambiguous | 0.4924 | ambiguous | -1.525 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
E/T | 0.4556 | ambiguous | 0.465 | ambiguous | -1.26 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/V | 0.3697 | ambiguous | 0.3868 | ambiguous | -0.14 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.50534172 | None | None | N |
E/W | 0.983 | likely_pathogenic | 0.977 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/Y | 0.9295 | likely_pathogenic | 0.9103 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.