Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19292 | 58099;58100;58101 | chr2:178594620;178594619;178594618 | chr2:179459347;179459346;179459345 |
N2AB | 17651 | 53176;53177;53178 | chr2:178594620;178594619;178594618 | chr2:179459347;179459346;179459345 |
N2A | 16724 | 50395;50396;50397 | chr2:178594620;178594619;178594618 | chr2:179459347;179459346;179459345 |
N2B | 10227 | 30904;30905;30906 | chr2:178594620;178594619;178594618 | chr2:179459347;179459346;179459345 |
Novex-1 | 10352 | 31279;31280;31281 | chr2:178594620;178594619;178594618 | chr2:179459347;179459346;179459345 |
Novex-2 | 10419 | 31480;31481;31482 | chr2:178594620;178594619;178594618 | chr2:179459347;179459346;179459345 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1225953212 | -0.555 | 0.625 | N | 0.476 | 0.141 | 0.300110245524 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs1225953212 | -0.555 | 0.625 | N | 0.476 | 0.141 | 0.300110245524 | gnomAD-4.0.0 | 1.59757E-06 | None | None | None | None | N | None | 0 | 2.29632E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1329 | likely_benign | 0.1515 | benign | -0.717 | Destabilizing | 0.625 | D | 0.476 | neutral | N | 0.509360673 | None | None | N |
E/C | 0.7523 | likely_pathogenic | 0.7869 | pathogenic | -0.264 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
E/D | 0.208 | likely_benign | 0.202 | benign | -0.76 | Destabilizing | 0.801 | D | 0.561 | neutral | N | 0.469229191 | None | None | N |
E/F | 0.6692 | likely_pathogenic | 0.7021 | pathogenic | -0.378 | Destabilizing | 0.974 | D | 0.636 | neutral | None | None | None | None | N |
E/G | 0.2795 | likely_benign | 0.2914 | benign | -1.008 | Destabilizing | 0.801 | D | 0.602 | neutral | N | 0.479775802 | None | None | N |
E/H | 0.4081 | ambiguous | 0.4314 | ambiguous | -0.466 | Destabilizing | 0.974 | D | 0.629 | neutral | None | None | None | None | N |
E/I | 0.1975 | likely_benign | 0.2268 | benign | 0.05 | Stabilizing | 0.029 | N | 0.413 | neutral | None | None | None | None | N |
E/K | 0.177 | likely_benign | 0.1877 | benign | -0.21 | Destabilizing | 0.669 | D | 0.579 | neutral | N | 0.445423838 | None | None | N |
E/L | 0.2711 | likely_benign | 0.3097 | benign | 0.05 | Stabilizing | 0.525 | D | 0.449 | neutral | None | None | None | None | N |
E/M | 0.3189 | likely_benign | 0.3665 | ambiguous | 0.367 | Stabilizing | 0.974 | D | 0.617 | neutral | None | None | None | None | N |
E/N | 0.2771 | likely_benign | 0.3137 | benign | -0.61 | Destabilizing | 0.949 | D | 0.637 | neutral | None | None | None | None | N |
E/P | 0.9622 | likely_pathogenic | 0.9693 | pathogenic | -0.184 | Destabilizing | 0.974 | D | 0.655 | neutral | None | None | None | None | N |
E/Q | 0.1099 | likely_benign | 0.1271 | benign | -0.53 | Destabilizing | 0.051 | N | 0.286 | neutral | N | 0.500335758 | None | None | N |
E/R | 0.2903 | likely_benign | 0.2927 | benign | 0.043 | Stabilizing | 0.904 | D | 0.634 | neutral | None | None | None | None | N |
E/S | 0.2075 | likely_benign | 0.2356 | benign | -0.837 | Destabilizing | 0.842 | D | 0.588 | neutral | None | None | None | None | N |
E/T | 0.1537 | likely_benign | 0.179 | benign | -0.601 | Destabilizing | 0.842 | D | 0.59 | neutral | None | None | None | None | N |
E/V | 0.1244 | likely_benign | 0.1393 | benign | -0.184 | Destabilizing | 0.051 | N | 0.339 | neutral | N | 0.49167899 | None | None | N |
E/W | 0.8907 | likely_pathogenic | 0.8956 | pathogenic | -0.152 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
E/Y | 0.605 | likely_pathogenic | 0.6206 | pathogenic | -0.13 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.