Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19296 | 58111;58112;58113 | chr2:178594608;178594607;178594606 | chr2:179459335;179459334;179459333 |
N2AB | 17655 | 53188;53189;53190 | chr2:178594608;178594607;178594606 | chr2:179459335;179459334;179459333 |
N2A | 16728 | 50407;50408;50409 | chr2:178594608;178594607;178594606 | chr2:179459335;179459334;179459333 |
N2B | 10231 | 30916;30917;30918 | chr2:178594608;178594607;178594606 | chr2:179459335;179459334;179459333 |
Novex-1 | 10356 | 31291;31292;31293 | chr2:178594608;178594607;178594606 | chr2:179459335;179459334;179459333 |
Novex-2 | 10423 | 31492;31493;31494 | chr2:178594608;178594607;178594606 | chr2:179459335;179459334;179459333 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs770490179 | -0.831 | 0.014 | N | 0.208 | 0.064 | 0.243972157842 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 8.93E-06 | 0 |
V/I | rs770490179 | -0.831 | 0.014 | N | 0.208 | 0.064 | 0.243972157842 | gnomAD-4.0.0 | 4.78903E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43906E-05 | 6.06171E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4161 | ambiguous | 0.4438 | ambiguous | -1.357 | Destabilizing | 0.822 | D | 0.457 | neutral | N | 0.491489775 | None | None | N |
V/C | 0.8005 | likely_pathogenic | 0.8265 | pathogenic | -1.501 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/D | 0.7973 | likely_pathogenic | 0.8541 | pathogenic | -2.029 | Highly Destabilizing | 0.99 | D | 0.819 | deleterious | N | 0.50645534 | None | None | N |
V/E | 0.6148 | likely_pathogenic | 0.6699 | pathogenic | -2.043 | Highly Destabilizing | 0.993 | D | 0.766 | deleterious | None | None | None | None | N |
V/F | 0.3776 | ambiguous | 0.4159 | ambiguous | -1.373 | Destabilizing | 0.942 | D | 0.743 | deleterious | N | 0.492745631 | None | None | N |
V/G | 0.5722 | likely_pathogenic | 0.6197 | pathogenic | -1.623 | Destabilizing | 0.971 | D | 0.801 | deleterious | N | 0.507469298 | None | None | N |
V/H | 0.8289 | likely_pathogenic | 0.8605 | pathogenic | -1.242 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
V/I | 0.0662 | likely_benign | 0.069 | benign | -0.727 | Destabilizing | 0.014 | N | 0.208 | neutral | N | 0.459163926 | None | None | N |
V/K | 0.5403 | ambiguous | 0.5748 | pathogenic | -1.122 | Destabilizing | 0.978 | D | 0.772 | deleterious | None | None | None | None | N |
V/L | 0.3668 | ambiguous | 0.4077 | ambiguous | -0.727 | Destabilizing | 0.247 | N | 0.324 | neutral | N | 0.475878689 | None | None | N |
V/M | 0.2326 | likely_benign | 0.2445 | benign | -0.747 | Destabilizing | 0.956 | D | 0.645 | neutral | None | None | None | None | N |
V/N | 0.5609 | ambiguous | 0.6241 | pathogenic | -1.104 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.8584 | likely_pathogenic | 0.9234 | pathogenic | -0.905 | Destabilizing | 0.993 | D | 0.785 | deleterious | None | None | None | None | N |
V/Q | 0.587 | likely_pathogenic | 0.6181 | pathogenic | -1.362 | Destabilizing | 0.993 | D | 0.785 | deleterious | None | None | None | None | N |
V/R | 0.528 | ambiguous | 0.5683 | pathogenic | -0.654 | Destabilizing | 0.993 | D | 0.815 | deleterious | None | None | None | None | N |
V/S | 0.5379 | ambiguous | 0.5665 | pathogenic | -1.521 | Destabilizing | 0.978 | D | 0.758 | deleterious | None | None | None | None | N |
V/T | 0.2973 | likely_benign | 0.3212 | benign | -1.433 | Destabilizing | 0.86 | D | 0.521 | neutral | None | None | None | None | N |
V/W | 0.9217 | likely_pathogenic | 0.9389 | pathogenic | -1.549 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
V/Y | 0.7459 | likely_pathogenic | 0.7863 | pathogenic | -1.186 | Destabilizing | 0.978 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.