Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19297 | 58114;58115;58116 | chr2:178594605;178594604;178594603 | chr2:179459332;179459331;179459330 |
N2AB | 17656 | 53191;53192;53193 | chr2:178594605;178594604;178594603 | chr2:179459332;179459331;179459330 |
N2A | 16729 | 50410;50411;50412 | chr2:178594605;178594604;178594603 | chr2:179459332;179459331;179459330 |
N2B | 10232 | 30919;30920;30921 | chr2:178594605;178594604;178594603 | chr2:179459332;179459331;179459330 |
Novex-1 | 10357 | 31294;31295;31296 | chr2:178594605;178594604;178594603 | chr2:179459332;179459331;179459330 |
Novex-2 | 10424 | 31495;31496;31497 | chr2:178594605;178594604;178594603 | chr2:179459332;179459331;179459330 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.032 | N | 0.324 | 0.306 | 0.342865806769 | gnomAD-4.0.0 | 1.59534E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43786E-05 | 0 |
T/S | None | None | 0.153 | N | 0.198 | 0.143 | 0.144782658237 | gnomAD-4.0.0 | 1.59529E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2229 | likely_benign | 0.2345 | benign | -0.572 | Destabilizing | 0.489 | N | 0.509 | neutral | N | 0.476273991 | None | None | N |
T/C | 0.6888 | likely_pathogenic | 0.6867 | pathogenic | -0.498 | Destabilizing | 0.998 | D | 0.516 | neutral | None | None | None | None | N |
T/D | 0.4565 | ambiguous | 0.4795 | ambiguous | -1.145 | Destabilizing | 0.956 | D | 0.465 | neutral | None | None | None | None | N |
T/E | 0.5473 | ambiguous | 0.577 | pathogenic | -1.138 | Destabilizing | 0.956 | D | 0.489 | neutral | None | None | None | None | N |
T/F | 0.6721 | likely_pathogenic | 0.6726 | pathogenic | -0.696 | Destabilizing | 0.956 | D | 0.566 | neutral | None | None | None | None | N |
T/G | 0.2277 | likely_benign | 0.2358 | benign | -0.832 | Destabilizing | 0.86 | D | 0.55 | neutral | None | None | None | None | N |
T/H | 0.4918 | ambiguous | 0.5053 | ambiguous | -1.238 | Destabilizing | 0.998 | D | 0.557 | neutral | None | None | None | None | N |
T/I | 0.7744 | likely_pathogenic | 0.7913 | pathogenic | 0.03 | Stabilizing | 0.032 | N | 0.324 | neutral | N | 0.519181225 | None | None | N |
T/K | 0.3842 | ambiguous | 0.3969 | ambiguous | -0.829 | Destabilizing | 0.956 | D | 0.475 | neutral | None | None | None | None | N |
T/L | 0.3089 | likely_benign | 0.3243 | benign | 0.03 | Stabilizing | 0.514 | D | 0.517 | neutral | None | None | None | None | N |
T/M | 0.2086 | likely_benign | 0.2202 | benign | 0.405 | Stabilizing | 0.988 | D | 0.523 | neutral | None | None | None | None | N |
T/N | 0.1825 | likely_benign | 0.1839 | benign | -0.953 | Destabilizing | 0.942 | D | 0.474 | neutral | N | 0.499415825 | None | None | N |
T/P | 0.854 | likely_pathogenic | 0.8677 | pathogenic | -0.139 | Destabilizing | 0.97 | D | 0.501 | neutral | D | 0.53053753 | None | None | N |
T/Q | 0.3732 | ambiguous | 0.3838 | ambiguous | -1.174 | Destabilizing | 0.978 | D | 0.505 | neutral | None | None | None | None | N |
T/R | 0.3798 | ambiguous | 0.3928 | ambiguous | -0.548 | Destabilizing | 0.978 | D | 0.515 | neutral | None | None | None | None | N |
T/S | 0.1209 | likely_benign | 0.1143 | benign | -1.045 | Destabilizing | 0.153 | N | 0.198 | neutral | N | 0.496124804 | None | None | N |
T/V | 0.6118 | likely_pathogenic | 0.6368 | pathogenic | -0.139 | Destabilizing | 0.514 | D | 0.52 | neutral | None | None | None | None | N |
T/W | 0.8913 | likely_pathogenic | 0.8946 | pathogenic | -0.725 | Destabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
T/Y | 0.6841 | likely_pathogenic | 0.6828 | pathogenic | -0.433 | Destabilizing | 0.978 | D | 0.576 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.