Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19298 | 58117;58118;58119 | chr2:178594602;178594601;178594600 | chr2:179459329;179459328;179459327 |
N2AB | 17657 | 53194;53195;53196 | chr2:178594602;178594601;178594600 | chr2:179459329;179459328;179459327 |
N2A | 16730 | 50413;50414;50415 | chr2:178594602;178594601;178594600 | chr2:179459329;179459328;179459327 |
N2B | 10233 | 30922;30923;30924 | chr2:178594602;178594601;178594600 | chr2:179459329;179459328;179459327 |
Novex-1 | 10358 | 31297;31298;31299 | chr2:178594602;178594601;178594600 | chr2:179459329;179459328;179459327 |
Novex-2 | 10425 | 31498;31499;31500 | chr2:178594602;178594601;178594600 | chr2:179459329;179459328;179459327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs781725039 | -0.564 | 0.204 | N | 0.257 | 0.215 | 0.208000267992 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.2414E-04 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs781725039 | -0.564 | 0.204 | N | 0.257 | 0.215 | 0.208000267992 | gnomAD-4.0.0 | 3.50909E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.11723E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3794 | ambiguous | 0.4232 | ambiguous | -0.129 | Destabilizing | 0.845 | D | 0.569 | neutral | None | None | None | None | N |
K/C | 0.7579 | likely_pathogenic | 0.7798 | pathogenic | -0.126 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
K/D | 0.7805 | likely_pathogenic | 0.8143 | pathogenic | -0.39 | Destabilizing | 0.845 | D | 0.597 | neutral | None | None | None | None | N |
K/E | 0.3241 | likely_benign | 0.3684 | ambiguous | -0.384 | Destabilizing | 0.805 | D | 0.545 | neutral | N | 0.495524584 | None | None | N |
K/F | 0.9587 | likely_pathogenic | 0.9653 | pathogenic | -0.436 | Destabilizing | 0.996 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/G | 0.5234 | ambiguous | 0.5708 | pathogenic | -0.366 | Destabilizing | 0.916 | D | 0.612 | neutral | None | None | None | None | N |
K/H | 0.5309 | ambiguous | 0.5618 | ambiguous | -0.887 | Destabilizing | 0.987 | D | 0.638 | neutral | None | None | None | None | N |
K/I | 0.7376 | likely_pathogenic | 0.7727 | pathogenic | 0.429 | Stabilizing | 0.983 | D | 0.743 | deleterious | N | 0.489246003 | None | None | N |
K/L | 0.6854 | likely_pathogenic | 0.7212 | pathogenic | 0.429 | Stabilizing | 0.975 | D | 0.619 | neutral | None | None | None | None | N |
K/M | 0.5059 | ambiguous | 0.5547 | ambiguous | 0.618 | Stabilizing | 0.997 | D | 0.617 | neutral | None | None | None | None | N |
K/N | 0.5852 | likely_pathogenic | 0.6265 | pathogenic | 0.093 | Stabilizing | 0.204 | N | 0.291 | neutral | N | 0.483347508 | None | None | N |
K/P | 0.8143 | likely_pathogenic | 0.8247 | pathogenic | 0.272 | Stabilizing | 0.987 | D | 0.634 | neutral | None | None | None | None | N |
K/Q | 0.1949 | likely_benign | 0.2118 | benign | -0.228 | Destabilizing | 0.204 | N | 0.257 | neutral | N | 0.518518874 | None | None | N |
K/R | 0.0766 | likely_benign | 0.0786 | benign | -0.039 | Destabilizing | 0.805 | D | 0.521 | neutral | N | 0.451987238 | None | None | N |
K/S | 0.4931 | ambiguous | 0.5416 | ambiguous | -0.39 | Destabilizing | 0.916 | D | 0.543 | neutral | None | None | None | None | N |
K/T | 0.4253 | ambiguous | 0.477 | ambiguous | -0.232 | Destabilizing | 0.892 | D | 0.599 | neutral | N | 0.521441749 | None | None | N |
K/V | 0.6288 | likely_pathogenic | 0.6752 | pathogenic | 0.272 | Stabilizing | 0.975 | D | 0.601 | neutral | None | None | None | None | N |
K/W | 0.937 | likely_pathogenic | 0.9414 | pathogenic | -0.392 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
K/Y | 0.8795 | likely_pathogenic | 0.8901 | pathogenic | 0.004 | Stabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.