Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19299 | 58120;58121;58122 | chr2:178594599;178594598;178594597 | chr2:179459326;179459325;179459324 |
N2AB | 17658 | 53197;53198;53199 | chr2:178594599;178594598;178594597 | chr2:179459326;179459325;179459324 |
N2A | 16731 | 50416;50417;50418 | chr2:178594599;178594598;178594597 | chr2:179459326;179459325;179459324 |
N2B | 10234 | 30925;30926;30927 | chr2:178594599;178594598;178594597 | chr2:179459326;179459325;179459324 |
Novex-1 | 10359 | 31300;31301;31302 | chr2:178594599;178594598;178594597 | chr2:179459326;179459325;179459324 |
Novex-2 | 10426 | 31501;31502;31503 | chr2:178594599;178594598;178594597 | chr2:179459326;179459325;179459324 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs768931487 | -0.861 | 0.295 | N | 0.39 | 0.107 | 0.0846915920261 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.57E-05 | None | 0 | 0 | 0 |
N/H | rs768931487 | -0.861 | 0.295 | N | 0.39 | 0.107 | 0.0846915920261 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
N/H | rs768931487 | -0.861 | 0.295 | N | 0.39 | 0.107 | 0.0846915920261 | gnomAD-4.0.0 | 5.13313E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.37577E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.219 | likely_benign | 0.1936 | benign | -0.673 | Destabilizing | 0.016 | N | 0.326 | neutral | None | None | None | None | N |
N/C | 0.3704 | ambiguous | 0.3081 | benign | 0.154 | Stabilizing | 0.864 | D | 0.361 | neutral | None | None | None | None | N |
N/D | 0.0633 | likely_benign | 0.0752 | benign | -0.613 | Destabilizing | None | N | 0.073 | neutral | N | 0.379433706 | None | None | N |
N/E | 0.1913 | likely_benign | 0.2156 | benign | -0.592 | Destabilizing | None | N | 0.099 | neutral | None | None | None | None | N |
N/F | 0.5848 | likely_pathogenic | 0.5331 | ambiguous | -0.753 | Destabilizing | 0.356 | N | 0.377 | neutral | None | None | None | None | N |
N/G | 0.2731 | likely_benign | 0.242 | benign | -0.932 | Destabilizing | 0.016 | N | 0.292 | neutral | None | None | None | None | N |
N/H | 0.1393 | likely_benign | 0.1442 | benign | -0.857 | Destabilizing | 0.295 | N | 0.39 | neutral | N | 0.478309834 | None | None | N |
N/I | 0.4273 | ambiguous | 0.3969 | ambiguous | -0.049 | Destabilizing | 0.171 | N | 0.429 | neutral | N | 0.477284268 | None | None | N |
N/K | 0.2921 | likely_benign | 0.3162 | benign | -0.159 | Destabilizing | 0.012 | N | 0.24 | neutral | N | 0.490988343 | None | None | N |
N/L | 0.3422 | ambiguous | 0.3159 | benign | -0.049 | Destabilizing | 0.072 | N | 0.44 | neutral | None | None | None | None | N |
N/M | 0.3564 | ambiguous | 0.322 | benign | 0.57 | Stabilizing | 0.864 | D | 0.347 | neutral | None | None | None | None | N |
N/P | 0.9305 | likely_pathogenic | 0.9248 | pathogenic | -0.229 | Destabilizing | 0.136 | N | 0.417 | neutral | None | None | None | None | N |
N/Q | 0.2746 | likely_benign | 0.286 | benign | -0.86 | Destabilizing | 0.038 | N | 0.387 | neutral | None | None | None | None | N |
N/R | 0.3717 | ambiguous | 0.3888 | ambiguous | -0.037 | Destabilizing | 0.038 | N | 0.381 | neutral | None | None | None | None | N |
N/S | 0.0883 | likely_benign | 0.0759 | benign | -0.611 | Destabilizing | None | N | 0.099 | neutral | N | 0.426070073 | None | None | N |
N/T | 0.0982 | likely_benign | 0.0888 | benign | -0.427 | Destabilizing | 0.001 | N | 0.125 | neutral | N | 0.416485011 | None | None | N |
N/V | 0.3585 | ambiguous | 0.3487 | ambiguous | -0.229 | Destabilizing | 0.072 | N | 0.449 | neutral | None | None | None | None | N |
N/W | 0.81 | likely_pathogenic | 0.7701 | pathogenic | -0.57 | Destabilizing | 0.864 | D | 0.472 | neutral | None | None | None | None | N |
N/Y | 0.1938 | likely_benign | 0.1887 | benign | -0.347 | Destabilizing | 0.56 | D | 0.365 | neutral | N | 0.468890477 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.