Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19300 | 58123;58124;58125 | chr2:178594596;178594595;178594594 | chr2:179459323;179459322;179459321 |
N2AB | 17659 | 53200;53201;53202 | chr2:178594596;178594595;178594594 | chr2:179459323;179459322;179459321 |
N2A | 16732 | 50419;50420;50421 | chr2:178594596;178594595;178594594 | chr2:179459323;179459322;179459321 |
N2B | 10235 | 30928;30929;30930 | chr2:178594596;178594595;178594594 | chr2:179459323;179459322;179459321 |
Novex-1 | 10360 | 31303;31304;31305 | chr2:178594596;178594595;178594594 | chr2:179459323;179459322;179459321 |
Novex-2 | 10427 | 31504;31505;31506 | chr2:178594596;178594595;178594594 | chr2:179459323;179459322;179459321 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1303630569 | -0.858 | 0.012 | N | 0.347 | 0.118 | 0.119812018005 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.57E-05 | None | 0 | 0 | 0 |
T/A | rs1303630569 | -0.858 | 0.012 | N | 0.347 | 0.118 | 0.119812018005 | gnomAD-4.0.0 | 4.78292E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.31047E-05 | 0 |
T/N | rs979451740 | None | 0.062 | N | 0.495 | 0.123 | 0.270889551736 | gnomAD-4.0.0 | 2.73922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.9541E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0892 | likely_benign | 0.1007 | benign | -0.709 | Destabilizing | 0.012 | N | 0.347 | neutral | N | 0.474210737 | None | None | N |
T/C | 0.2506 | likely_benign | 0.3017 | benign | -0.96 | Destabilizing | 0.824 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/D | 0.3961 | ambiguous | 0.4226 | ambiguous | -1.859 | Destabilizing | 0.081 | N | 0.539 | neutral | None | None | None | None | N |
T/E | 0.3266 | likely_benign | 0.3426 | ambiguous | -1.788 | Destabilizing | 0.081 | N | 0.541 | neutral | None | None | None | None | N |
T/F | 0.2189 | likely_benign | 0.2548 | benign | -0.79 | Destabilizing | 0.555 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/G | 0.2293 | likely_benign | 0.2721 | benign | -0.992 | Destabilizing | 0.035 | N | 0.461 | neutral | None | None | None | None | N |
T/H | 0.2211 | likely_benign | 0.2489 | benign | -1.319 | Destabilizing | 0.555 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/I | 0.3037 | likely_benign | 0.34 | ambiguous | -0.03 | Destabilizing | 0.117 | N | 0.648 | neutral | N | 0.482564187 | None | None | N |
T/K | 0.3567 | ambiguous | 0.3816 | ambiguous | -0.829 | Destabilizing | 0.081 | N | 0.541 | neutral | None | None | None | None | N |
T/L | 0.1452 | likely_benign | 0.1604 | benign | -0.03 | Destabilizing | 0.149 | N | 0.541 | neutral | None | None | None | None | N |
T/M | 0.1002 | likely_benign | 0.1004 | benign | 0.122 | Stabilizing | 0.791 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/N | 0.1341 | likely_benign | 0.1613 | benign | -1.28 | Destabilizing | 0.062 | N | 0.495 | neutral | N | 0.502570774 | None | None | N |
T/P | 0.9612 | likely_pathogenic | 0.951 | pathogenic | -0.225 | Destabilizing | 0.117 | N | 0.625 | neutral | N | 0.494085076 | None | None | N |
T/Q | 0.2827 | likely_benign | 0.3016 | benign | -1.423 | Destabilizing | 0.38 | N | 0.663 | neutral | None | None | None | None | N |
T/R | 0.3067 | likely_benign | 0.3225 | benign | -0.636 | Destabilizing | 0.38 | N | 0.654 | neutral | None | None | None | None | N |
T/S | 0.073 | likely_benign | 0.0797 | benign | -1.306 | Destabilizing | None | N | 0.155 | neutral | N | 0.361514375 | None | None | N |
T/V | 0.2121 | likely_benign | 0.2408 | benign | -0.225 | Destabilizing | 0.149 | N | 0.491 | neutral | None | None | None | None | N |
T/W | 0.5586 | ambiguous | 0.599 | pathogenic | -0.906 | Destabilizing | 0.935 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/Y | 0.2167 | likely_benign | 0.2642 | benign | -0.526 | Destabilizing | 0.555 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.