Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19301 | 58126;58127;58128 | chr2:178594593;178594592;178594591 | chr2:179459320;179459319;179459318 |
N2AB | 17660 | 53203;53204;53205 | chr2:178594593;178594592;178594591 | chr2:179459320;179459319;179459318 |
N2A | 16733 | 50422;50423;50424 | chr2:178594593;178594592;178594591 | chr2:179459320;179459319;179459318 |
N2B | 10236 | 30931;30932;30933 | chr2:178594593;178594592;178594591 | chr2:179459320;179459319;179459318 |
Novex-1 | 10361 | 31306;31307;31308 | chr2:178594593;178594592;178594591 | chr2:179459320;179459319;179459318 |
Novex-2 | 10428 | 31507;31508;31509 | chr2:178594593;178594592;178594591 | chr2:179459320;179459319;179459318 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1210344440 | None | 0.122 | N | 0.205 | 0.163 | 0.365120060079 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1210344440 | None | 0.122 | N | 0.205 | 0.163 | 0.365120060079 | gnomAD-4.0.0 | 2.56553E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79207E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6611 | likely_pathogenic | 0.6347 | pathogenic | -2.235 | Highly Destabilizing | 0.91 | D | 0.629 | neutral | N | 0.511902333 | None | None | N |
V/C | 0.9056 | likely_pathogenic | 0.9239 | pathogenic | -2.275 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
V/D | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -2.946 | Highly Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/E | 0.994 | likely_pathogenic | 0.9929 | pathogenic | -2.662 | Highly Destabilizing | 0.998 | D | 0.818 | deleterious | D | 0.533740308 | None | None | N |
V/F | 0.864 | likely_pathogenic | 0.8003 | pathogenic | -1.385 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
V/G | 0.937 | likely_pathogenic | 0.9344 | pathogenic | -2.844 | Highly Destabilizing | 0.998 | D | 0.817 | deleterious | N | 0.515636053 | None | None | N |
V/H | 0.9976 | likely_pathogenic | 0.997 | pathogenic | -2.702 | Highly Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
V/I | 0.1019 | likely_benign | 0.0947 | benign | -0.501 | Destabilizing | 0.122 | N | 0.205 | neutral | N | 0.448944146 | None | None | N |
V/K | 0.995 | likely_pathogenic | 0.993 | pathogenic | -1.928 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
V/L | 0.5513 | ambiguous | 0.4658 | ambiguous | -0.501 | Destabilizing | 0.031 | N | 0.307 | neutral | N | 0.497546169 | None | None | N |
V/M | 0.5791 | likely_pathogenic | 0.5211 | ambiguous | -0.887 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/N | 0.9924 | likely_pathogenic | 0.9919 | pathogenic | -2.487 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -1.054 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
V/Q | 0.9905 | likely_pathogenic | 0.9887 | pathogenic | -2.197 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
V/R | 0.9903 | likely_pathogenic | 0.9873 | pathogenic | -1.932 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
V/S | 0.95 | likely_pathogenic | 0.9474 | pathogenic | -3.146 | Highly Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
V/T | 0.8395 | likely_pathogenic | 0.8246 | pathogenic | -2.687 | Highly Destabilizing | 0.985 | D | 0.706 | prob.neutral | None | None | None | None | N |
V/W | 0.9986 | likely_pathogenic | 0.9977 | pathogenic | -1.892 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
V/Y | 0.9894 | likely_pathogenic | 0.9853 | pathogenic | -1.519 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.