Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19302 | 58129;58130;58131 | chr2:178594590;178594589;178594588 | chr2:179459317;179459316;179459315 |
N2AB | 17661 | 53206;53207;53208 | chr2:178594590;178594589;178594588 | chr2:179459317;179459316;179459315 |
N2A | 16734 | 50425;50426;50427 | chr2:178594590;178594589;178594588 | chr2:179459317;179459316;179459315 |
N2B | 10237 | 30934;30935;30936 | chr2:178594590;178594589;178594588 | chr2:179459317;179459316;179459315 |
Novex-1 | 10362 | 31309;31310;31311 | chr2:178594590;178594589;178594588 | chr2:179459317;179459316;179459315 |
Novex-2 | 10429 | 31510;31511;31512 | chr2:178594590;178594589;178594588 | chr2:179459317;179459316;179459315 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.117 | N | 0.701 | 0.119 | 0.187945064343 | gnomAD-4.0.0 | 1.59357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02737E-05 |
T/P | rs2051000706 | None | 0.117 | N | 0.681 | 0.239 | 0.112648838833 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs2051000706 | None | 0.117 | N | 0.681 | 0.239 | 0.112648838833 | gnomAD-4.0.0 | 3.8478E-06 | None | None | None | None | N | None | 5.07666E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1236 | likely_benign | 0.1141 | benign | -1.022 | Destabilizing | 0.012 | N | 0.504 | neutral | N | 0.492508496 | None | None | N |
T/C | 0.3333 | likely_benign | 0.3501 | ambiguous | -0.986 | Destabilizing | 0.824 | D | 0.671 | neutral | None | None | None | None | N |
T/D | 0.5189 | ambiguous | 0.4758 | ambiguous | -1.437 | Destabilizing | 0.081 | N | 0.675 | neutral | None | None | None | None | N |
T/E | 0.4366 | ambiguous | 0.4403 | ambiguous | -1.321 | Destabilizing | 0.081 | N | 0.669 | neutral | None | None | None | None | N |
T/F | 0.2906 | likely_benign | 0.2657 | benign | -0.729 | Destabilizing | 0.555 | D | 0.669 | neutral | None | None | None | None | N |
T/G | 0.3245 | likely_benign | 0.3006 | benign | -1.371 | Destabilizing | 0.035 | N | 0.607 | neutral | None | None | None | None | N |
T/H | 0.3209 | likely_benign | 0.3109 | benign | -1.555 | Destabilizing | 0.555 | D | 0.665 | neutral | None | None | None | None | N |
T/I | 0.1876 | likely_benign | 0.2069 | benign | -0.143 | Destabilizing | 0.117 | N | 0.701 | prob.neutral | N | 0.467631481 | None | None | N |
T/K | 0.4244 | ambiguous | 0.4095 | ambiguous | -0.898 | Destabilizing | 0.081 | N | 0.672 | neutral | None | None | None | None | N |
T/L | 0.158 | likely_benign | 0.158 | benign | -0.143 | Destabilizing | 0.149 | N | 0.671 | neutral | None | None | None | None | N |
T/M | 0.1168 | likely_benign | 0.1127 | benign | -0.117 | Destabilizing | 0.791 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/N | 0.1784 | likely_benign | 0.1781 | benign | -1.28 | Destabilizing | 0.062 | N | 0.673 | neutral | N | 0.49591416 | None | None | N |
T/P | 0.8313 | likely_pathogenic | 0.7854 | pathogenic | -0.404 | Destabilizing | 0.117 | N | 0.681 | prob.neutral | N | 0.484628102 | None | None | N |
T/Q | 0.338 | likely_benign | 0.335 | benign | -1.276 | Destabilizing | 0.38 | N | 0.697 | prob.neutral | None | None | None | None | N |
T/R | 0.3993 | ambiguous | 0.3779 | ambiguous | -0.846 | Destabilizing | 0.38 | N | 0.704 | prob.neutral | None | None | None | None | N |
T/S | 0.1046 | likely_benign | 0.0976 | benign | -1.46 | Destabilizing | None | N | 0.325 | neutral | N | 0.42297384 | None | None | N |
T/V | 0.1566 | likely_benign | 0.1686 | benign | -0.404 | Destabilizing | 0.149 | N | 0.662 | neutral | None | None | None | None | N |
T/W | 0.6753 | likely_pathogenic | 0.6319 | pathogenic | -0.793 | Destabilizing | 0.935 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/Y | 0.3146 | likely_benign | 0.3064 | benign | -0.48 | Destabilizing | 0.555 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.