Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19304 | 58135;58136;58137 | chr2:178594584;178594583;178594582 | chr2:179459311;179459310;179459309 |
N2AB | 17663 | 53212;53213;53214 | chr2:178594584;178594583;178594582 | chr2:179459311;179459310;179459309 |
N2A | 16736 | 50431;50432;50433 | chr2:178594584;178594583;178594582 | chr2:179459311;179459310;179459309 |
N2B | 10239 | 30940;30941;30942 | chr2:178594584;178594583;178594582 | chr2:179459311;179459310;179459309 |
Novex-1 | 10364 | 31315;31316;31317 | chr2:178594584;178594583;178594582 | chr2:179459311;179459310;179459309 |
Novex-2 | 10431 | 31516;31517;31518 | chr2:178594584;178594583;178594582 | chr2:179459311;179459310;179459309 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.966 | N | 0.45 | 0.397 | 0.457197642564 | gnomAD-4.0.0 | 3.42283E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.499E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1018 | likely_benign | 0.0911 | benign | -1.056 | Destabilizing | 0.022 | N | 0.212 | neutral | N | 0.453931465 | None | None | N |
T/C | 0.3335 | likely_benign | 0.3557 | ambiguous | -0.78 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
T/D | 0.5515 | ambiguous | 0.458 | ambiguous | -1.622 | Destabilizing | 0.842 | D | 0.379 | neutral | None | None | None | None | N |
T/E | 0.3727 | ambiguous | 0.3275 | benign | -1.431 | Destabilizing | 0.842 | D | 0.381 | neutral | None | None | None | None | N |
T/F | 0.2509 | likely_benign | 0.2201 | benign | -0.531 | Destabilizing | 0.991 | D | 0.569 | neutral | None | None | None | None | N |
T/G | 0.2528 | likely_benign | 0.2594 | benign | -1.476 | Destabilizing | 0.525 | D | 0.441 | neutral | None | None | None | None | N |
T/H | 0.2962 | likely_benign | 0.2702 | benign | -1.62 | Destabilizing | 0.998 | D | 0.574 | neutral | None | None | None | None | N |
T/I | 0.1804 | likely_benign | 0.1597 | benign | 0.047 | Stabilizing | 0.966 | D | 0.439 | neutral | N | 0.476461347 | None | None | N |
T/K | 0.3517 | ambiguous | 0.2988 | benign | -0.806 | Destabilizing | 0.842 | D | 0.384 | neutral | None | None | None | None | N |
T/L | 0.121 | likely_benign | 0.1075 | benign | 0.047 | Stabilizing | 0.842 | D | 0.412 | neutral | None | None | None | None | N |
T/M | 0.1016 | likely_benign | 0.0926 | benign | 0.033 | Stabilizing | 0.991 | D | 0.477 | neutral | None | None | None | None | N |
T/N | 0.1671 | likely_benign | 0.1516 | benign | -1.439 | Destabilizing | 0.801 | D | 0.354 | neutral | N | 0.467925744 | None | None | N |
T/P | 0.8854 | likely_pathogenic | 0.8177 | pathogenic | -0.289 | Destabilizing | 0.966 | D | 0.45 | neutral | N | 0.51596154 | None | None | N |
T/Q | 0.2613 | likely_benign | 0.2485 | benign | -1.187 | Destabilizing | 0.974 | D | 0.453 | neutral | None | None | None | None | N |
T/R | 0.313 | likely_benign | 0.2543 | benign | -0.996 | Destabilizing | 0.949 | D | 0.451 | neutral | None | None | None | None | N |
T/S | 0.1047 | likely_benign | 0.1051 | benign | -1.604 | Destabilizing | 0.022 | N | 0.235 | neutral | N | 0.421968188 | None | None | N |
T/V | 0.1527 | likely_benign | 0.1451 | benign | -0.289 | Destabilizing | 0.842 | D | 0.395 | neutral | None | None | None | None | N |
T/W | 0.6508 | likely_pathogenic | 0.5891 | pathogenic | -0.765 | Destabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
T/Y | 0.3171 | likely_benign | 0.2865 | benign | -0.403 | Destabilizing | 0.991 | D | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.