Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19311 | 58156;58157;58158 | chr2:178594563;178594562;178594561 | chr2:179459290;179459289;179459288 |
N2AB | 17670 | 53233;53234;53235 | chr2:178594563;178594562;178594561 | chr2:179459290;179459289;179459288 |
N2A | 16743 | 50452;50453;50454 | chr2:178594563;178594562;178594561 | chr2:179459290;179459289;179459288 |
N2B | 10246 | 30961;30962;30963 | chr2:178594563;178594562;178594561 | chr2:179459290;179459289;179459288 |
Novex-1 | 10371 | 31336;31337;31338 | chr2:178594563;178594562;178594561 | chr2:179459290;179459289;179459288 |
Novex-2 | 10438 | 31537;31538;31539 | chr2:178594563;178594562;178594561 | chr2:179459290;179459289;179459288 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.999 | N | 0.69 | 0.363 | 0.391775403332 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86048E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9285 | likely_pathogenic | 0.8913 | pathogenic | -0.818 | Destabilizing | 0.993 | D | 0.628 | neutral | N | 0.494045397 | None | None | I |
D/C | 0.9885 | likely_pathogenic | 0.9814 | pathogenic | -0.371 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/E | 0.9333 | likely_pathogenic | 0.9119 | pathogenic | -0.742 | Destabilizing | 0.977 | D | 0.413 | neutral | N | 0.495829369 | None | None | I |
D/F | 0.9929 | likely_pathogenic | 0.9869 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
D/G | 0.9274 | likely_pathogenic | 0.8895 | pathogenic | -1.185 | Destabilizing | 0.955 | D | 0.5 | neutral | N | 0.519760202 | None | None | I |
D/H | 0.9616 | likely_pathogenic | 0.9303 | pathogenic | -0.904 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.493489192 | None | None | I |
D/I | 0.9844 | likely_pathogenic | 0.9728 | pathogenic | 0.166 | Stabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | I |
D/K | 0.9862 | likely_pathogenic | 0.977 | pathogenic | -0.607 | Destabilizing | 0.995 | D | 0.588 | neutral | None | None | None | None | I |
D/L | 0.9756 | likely_pathogenic | 0.9606 | pathogenic | 0.166 | Stabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/M | 0.9931 | likely_pathogenic | 0.9878 | pathogenic | 0.745 | Stabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
D/N | 0.4156 | ambiguous | 0.2704 | benign | -0.991 | Destabilizing | 0.117 | N | 0.193 | neutral | N | 0.508766027 | None | None | I |
D/P | 0.9834 | likely_pathogenic | 0.9742 | pathogenic | -0.138 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
D/Q | 0.9804 | likely_pathogenic | 0.9687 | pathogenic | -0.837 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/R | 0.9849 | likely_pathogenic | 0.9758 | pathogenic | -0.526 | Destabilizing | 0.995 | D | 0.722 | prob.delet. | None | None | None | None | I |
D/S | 0.7149 | likely_pathogenic | 0.6034 | pathogenic | -1.354 | Destabilizing | 0.966 | D | 0.491 | neutral | None | None | None | None | I |
D/T | 0.8668 | likely_pathogenic | 0.7854 | pathogenic | -1.039 | Destabilizing | 0.995 | D | 0.571 | neutral | None | None | None | None | I |
D/V | 0.9605 | likely_pathogenic | 0.931 | pathogenic | -0.138 | Destabilizing | 0.997 | D | 0.722 | prob.delet. | N | 0.504503103 | None | None | I |
D/W | 0.9982 | likely_pathogenic | 0.9965 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
D/Y | 0.9477 | likely_pathogenic | 0.9024 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | D | 0.537864457 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.