Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19316 | 58171;58172;58173 | chr2:178594548;178594547;178594546 | chr2:179459275;179459274;179459273 |
N2AB | 17675 | 53248;53249;53250 | chr2:178594548;178594547;178594546 | chr2:179459275;179459274;179459273 |
N2A | 16748 | 50467;50468;50469 | chr2:178594548;178594547;178594546 | chr2:179459275;179459274;179459273 |
N2B | 10251 | 30976;30977;30978 | chr2:178594548;178594547;178594546 | chr2:179459275;179459274;179459273 |
Novex-1 | 10376 | 31351;31352;31353 | chr2:178594548;178594547;178594546 | chr2:179459275;179459274;179459273 |
Novex-2 | 10443 | 31552;31553;31554 | chr2:178594548;178594547;178594546 | chr2:179459275;179459274;179459273 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs756090879 | -1.564 | 0.333 | N | 0.292 | 0.114 | 0.559847471112 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs756090879 | -1.564 | 0.333 | N | 0.292 | 0.114 | 0.559847471112 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43365E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.984 | likely_pathogenic | 0.9823 | pathogenic | -2.522 | Highly Destabilizing | 0.992 | D | 0.691 | prob.neutral | None | None | None | None | I |
I/C | 0.979 | likely_pathogenic | 0.982 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
I/D | 0.9969 | likely_pathogenic | 0.9959 | pathogenic | -2.99 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
I/E | 0.994 | likely_pathogenic | 0.9934 | pathogenic | -2.818 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
I/F | 0.9553 | likely_pathogenic | 0.9487 | pathogenic | -1.615 | Destabilizing | 0.998 | D | 0.759 | deleterious | D | 0.5403369 | None | None | I |
I/G | 0.9958 | likely_pathogenic | 0.9952 | pathogenic | -3.0 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
I/H | 0.9955 | likely_pathogenic | 0.9955 | pathogenic | -2.467 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
I/K | 0.9907 | likely_pathogenic | 0.99 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
I/L | 0.4287 | ambiguous | 0.4673 | ambiguous | -1.155 | Destabilizing | 0.889 | D | 0.506 | neutral | D | 0.528240009 | None | None | I |
I/M | 0.5757 | likely_pathogenic | 0.5483 | ambiguous | -0.923 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | D | 0.53151549 | None | None | I |
I/N | 0.8717 | likely_pathogenic | 0.8461 | pathogenic | -2.204 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | D | 0.543885753 | None | None | I |
I/P | 0.9793 | likely_pathogenic | 0.9758 | pathogenic | -1.591 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
I/Q | 0.9932 | likely_pathogenic | 0.9931 | pathogenic | -2.168 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
I/R | 0.9896 | likely_pathogenic | 0.9897 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
I/S | 0.9835 | likely_pathogenic | 0.9796 | pathogenic | -2.807 | Highly Destabilizing | 0.998 | D | 0.782 | deleterious | D | 0.543125285 | None | None | I |
I/T | 0.965 | likely_pathogenic | 0.958 | pathogenic | -2.515 | Highly Destabilizing | 0.989 | D | 0.806 | deleterious | N | 0.513664724 | None | None | I |
I/V | 0.1953 | likely_benign | 0.1788 | benign | -1.591 | Destabilizing | 0.333 | N | 0.292 | neutral | N | 0.45895607 | None | None | I |
I/W | 0.9977 | likely_pathogenic | 0.9979 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
I/Y | 0.9894 | likely_pathogenic | 0.989 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.