Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19323 | 58192;58193;58194 | chr2:178594527;178594526;178594525 | chr2:179459254;179459253;179459252 |
N2AB | 17682 | 53269;53270;53271 | chr2:178594527;178594526;178594525 | chr2:179459254;179459253;179459252 |
N2A | 16755 | 50488;50489;50490 | chr2:178594527;178594526;178594525 | chr2:179459254;179459253;179459252 |
N2B | 10258 | 30997;30998;30999 | chr2:178594527;178594526;178594525 | chr2:179459254;179459253;179459252 |
Novex-1 | 10383 | 31372;31373;31374 | chr2:178594527;178594526;178594525 | chr2:179459254;179459253;179459252 |
Novex-2 | 10450 | 31573;31574;31575 | chr2:178594527;178594526;178594525 | chr2:179459254;179459253;179459252 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.966 | N | 0.808 | 0.289 | 0.190952846119 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1028 | likely_benign | 0.1043 | benign | -0.798 | Destabilizing | 0.067 | N | 0.351 | neutral | None | None | None | None | N |
S/C | 0.1003 | likely_benign | 0.094 | benign | -0.492 | Destabilizing | 0.028 | N | 0.648 | neutral | N | 0.492734995 | None | None | N |
S/D | 0.8697 | likely_pathogenic | 0.8304 | pathogenic | -1.85 | Destabilizing | 0.915 | D | 0.763 | deleterious | None | None | None | None | N |
S/E | 0.8027 | likely_pathogenic | 0.7673 | pathogenic | -1.58 | Destabilizing | 0.915 | D | 0.761 | deleterious | None | None | None | None | N |
S/F | 0.5185 | ambiguous | 0.3839 | ambiguous | -0.453 | Destabilizing | 0.974 | D | 0.809 | deleterious | None | None | None | None | N |
S/G | 0.1732 | likely_benign | 0.1585 | benign | -1.216 | Destabilizing | 0.801 | D | 0.708 | prob.delet. | N | 0.480000558 | None | None | N |
S/H | 0.542 | ambiguous | 0.4571 | ambiguous | -1.415 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
S/I | 0.4852 | ambiguous | 0.3768 | ambiguous | 0.304 | Stabilizing | 0.669 | D | 0.727 | prob.delet. | N | 0.438479223 | None | None | N |
S/K | 0.852 | likely_pathogenic | 0.8023 | pathogenic | -0.142 | Destabilizing | 0.915 | D | 0.757 | deleterious | None | None | None | None | N |
S/L | 0.3018 | likely_benign | 0.234 | benign | 0.304 | Stabilizing | 0.728 | D | 0.724 | prob.delet. | None | None | None | None | N |
S/M | 0.3054 | likely_benign | 0.2628 | benign | -0.066 | Destabilizing | 0.974 | D | 0.797 | deleterious | None | None | None | None | N |
S/N | 0.3959 | ambiguous | 0.3341 | benign | -1.089 | Destabilizing | 0.966 | D | 0.779 | deleterious | N | 0.47012779 | None | None | N |
S/P | 0.9946 | likely_pathogenic | 0.9931 | pathogenic | -0.033 | Destabilizing | 0.974 | D | 0.792 | deleterious | None | None | None | None | N |
S/Q | 0.6209 | likely_pathogenic | 0.6005 | pathogenic | -0.615 | Destabilizing | 0.991 | D | 0.768 | deleterious | None | None | None | None | N |
S/R | 0.8191 | likely_pathogenic | 0.7538 | pathogenic | -0.737 | Destabilizing | 0.966 | D | 0.808 | deleterious | N | 0.369139355 | None | None | N |
S/T | 0.1501 | likely_benign | 0.1283 | benign | -0.642 | Destabilizing | 0.051 | N | 0.457 | neutral | N | 0.475362743 | None | None | N |
S/V | 0.3777 | ambiguous | 0.3168 | benign | -0.033 | Destabilizing | 0.067 | N | 0.683 | prob.neutral | None | None | None | None | N |
S/W | 0.6594 | likely_pathogenic | 0.5437 | ambiguous | -0.928 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
S/Y | 0.3522 | ambiguous | 0.2459 | benign | -0.409 | Destabilizing | 0.991 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.