Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19329 | 58210;58211;58212 | chr2:178594509;178594508;178594507 | chr2:179459236;179459235;179459234 |
N2AB | 17688 | 53287;53288;53289 | chr2:178594509;178594508;178594507 | chr2:179459236;179459235;179459234 |
N2A | 16761 | 50506;50507;50508 | chr2:178594509;178594508;178594507 | chr2:179459236;179459235;179459234 |
N2B | 10264 | 31015;31016;31017 | chr2:178594509;178594508;178594507 | chr2:179459236;179459235;179459234 |
Novex-1 | 10389 | 31390;31391;31392 | chr2:178594509;178594508;178594507 | chr2:179459236;179459235;179459234 |
Novex-2 | 10456 | 31591;31592;31593 | chr2:178594509;178594508;178594507 | chr2:179459236;179459235;179459234 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs375818281 | -0.495 | 0.001 | N | 0.107 | 0.072 | 0.198526703765 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs375818281 | -0.495 | 0.001 | N | 0.107 | 0.072 | 0.198526703765 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs375818281 | -0.495 | 0.001 | N | 0.107 | 0.072 | 0.198526703765 | gnomAD-4.0.0 | 1.36875E-06 | None | None | None | None | N | None | 5.97979E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs975610705 | -0.323 | 0.722 | N | 0.489 | 0.241 | 0.397838977388 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs975610705 | -0.323 | 0.722 | N | 0.489 | 0.241 | 0.397838977388 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs975610705 | -0.323 | 0.722 | N | 0.489 | 0.241 | 0.397838977388 | gnomAD-4.0.0 | 1.31501E-05 | None | None | None | None | N | None | 4.82486E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3092 | likely_benign | 0.2417 | benign | None | Stabilizing | 0.722 | D | 0.507 | neutral | N | 0.505976438 | None | None | N |
E/C | 0.9458 | likely_pathogenic | 0.9245 | pathogenic | -0.228 | Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | N |
E/D | 0.0925 | likely_benign | 0.0942 | benign | -0.382 | Destabilizing | 0.001 | N | 0.107 | neutral | N | 0.425419499 | None | None | N |
E/F | 0.9468 | likely_pathogenic | 0.9125 | pathogenic | -0.082 | Destabilizing | 0.987 | D | 0.575 | neutral | None | None | None | None | N |
E/G | 0.2399 | likely_benign | 0.1801 | benign | -0.098 | Destabilizing | 0.722 | D | 0.502 | neutral | N | 0.443501041 | None | None | N |
E/H | 0.7253 | likely_pathogenic | 0.6454 | pathogenic | 0.548 | Stabilizing | 0.987 | D | 0.469 | neutral | None | None | None | None | N |
E/I | 0.7324 | likely_pathogenic | 0.6357 | pathogenic | 0.196 | Stabilizing | 0.961 | D | 0.574 | neutral | None | None | None | None | N |
E/K | 0.3592 | ambiguous | 0.2391 | benign | 0.378 | Stabilizing | 0.722 | D | 0.509 | neutral | N | 0.467650124 | None | None | N |
E/L | 0.7253 | likely_pathogenic | 0.6243 | pathogenic | 0.196 | Stabilizing | 0.961 | D | 0.593 | neutral | None | None | None | None | N |
E/M | 0.7709 | likely_pathogenic | 0.6838 | pathogenic | -0.046 | Destabilizing | 0.996 | D | 0.561 | neutral | None | None | None | None | N |
E/N | 0.2985 | likely_benign | 0.2627 | benign | 0.167 | Stabilizing | 0.633 | D | 0.505 | neutral | None | None | None | None | N |
E/P | 0.563 | ambiguous | 0.4729 | ambiguous | 0.148 | Stabilizing | 0.961 | D | 0.459 | neutral | None | None | None | None | N |
E/Q | 0.2867 | likely_benign | 0.2225 | benign | 0.163 | Stabilizing | 0.722 | D | 0.489 | neutral | N | 0.477635044 | None | None | N |
E/R | 0.5742 | likely_pathogenic | 0.4233 | ambiguous | 0.598 | Stabilizing | 0.961 | D | 0.48 | neutral | None | None | None | None | N |
E/S | 0.2707 | likely_benign | 0.234 | benign | 0.032 | Stabilizing | 0.633 | D | 0.489 | neutral | None | None | None | None | N |
E/T | 0.3599 | ambiguous | 0.2999 | benign | 0.12 | Stabilizing | 0.775 | D | 0.487 | neutral | None | None | None | None | N |
E/V | 0.5205 | ambiguous | 0.4044 | ambiguous | 0.148 | Stabilizing | 0.949 | D | 0.503 | neutral | N | 0.502109414 | None | None | N |
E/W | 0.9719 | likely_pathogenic | 0.9492 | pathogenic | -0.054 | Destabilizing | 0.996 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/Y | 0.8682 | likely_pathogenic | 0.8083 | pathogenic | 0.136 | Stabilizing | 0.987 | D | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.